| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1227 |
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| Symbol | glcB |
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| ID | 5711785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1269474 |
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| End bp | 1271648 |
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| Gene Length | 2175 bp |
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| Protein Length | 724 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641267139 |
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| Product | malate synthase G |
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| Protein accession | YP_001532570 |
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| Protein GI | 159043776 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2225] Malate synthase |
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| TIGRFAM ID | [TIGR01345] malate synthase G |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.233385 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGGG TAGAGCGCGC AGGTCTGCAG GTGGCCCCCG AGCTTGTGGA GTTCCTCGAA
ACGCAGGCGC TGCCGGGCAC GGGTGTGACC GCGGCGGCGT TCTGGGAGGG GTTGTCGGCG
CTGGTCCATG AGGAAGGCCC GACCAACCGG GCGCTGCTGG CCAAGCGCAC GGAGTTGCAG
CGCAAGATCG ATGCCTGGCA TGTCGCGCGC AAGGGCCAGC CCCATGACGC GGCGGCCTAT
GCGGCGTTCT TGCGCGAAAT CGGCTACCTT GTGCCGGAGC CTGAGGATTT CGAGATCGAC
ACCGCCAACG TGGATCCGGA GATCGCGACC ATTCCCGGCC CGCAGCTTGT CGTGCCGATC
ACCAATGCGC GCTATGCCCT GAACGCGGCG AATGCGCGCT GGGGGTCGCT CTATGACGCG
CTTTACGGCA CGGATGCCCT GGGCGATCTG CCGTCGGGCA AGGGGTTCGA TCCCGAGCGC
GGGGCGCGGG TGATGGCCTG GGCGCGGGAT CACCTGGACC ATGCGGCCCC GATTGCGGGC
GTGTCCTGGG CGGATGTCAC GCGGATCGAC GTGGCCGATG GGGCGCTGGA GCTGGTGGCG
GGCGATCTGC GCCCGCTGGT CGATCCGGCG CAATTCGCAG GCTACACCAC GGGGCCTGCG
GGCGATGTGA CCTCGGTGCT GCTGCGCAAG AACGGGCTGC ATCTGCGGGT GATGATCGAC
CCCACGAGCC GTATCGGCGC GGCGGATCCG GCGGGGATTT CCGACGTCAT CATCGAGGCG
GCGATCTCGG CCATCATGGA TTGCGAGGAC AGTGTCGCGG CGGTGGATGC AGAGGACAAG
GTGCTGGCCT ATGGCAACTG GCTGGGCCTG ATGAAGGGCG ACTTGTCGCA AGAGGTGACC
AAGGGCGGCA AGAGCTTCAC CCGGGCGTTG GCCCGGGACG TGGTGGCGAC CGCGCCCAAT
GGCGACCGGT TGGTGCTGAA GGGTCGGGCG CTGATGCTGG TGCGCAATGT CGGGCACCTG
ATGACCAACC CGGCGATCCT GGATCGCGAC GGGGCGGAGA TCGGCGAGGG GCTGATGGAT
GCCATGGTCA CCACGCTGAT CGCCATGCAC GATCTGGGCC GTGCGGGGGG CAACTCGGTC
CACGGGTCGG TCTATGTGGT CAAGCCGAAG ATGCACGGGC CCGAAGAGGT CGCCTTCACC
GACCGGATCT TCACCCGGGT GGAGGCGGCG CTGGGGCTGC CGGCGAACAC GGTCAAGATC
GGGATCATGG ACGAGGAGCG GCGCACGAGC GCGAACCTCA AGGCCTGCAT CCATGCGGCC
CGGTCGCGGG TGGCGTTCAT CAACACGGGC TTCCTCGACC GCACGGGCGA CGAGATCCAC
ACTTCGATGG AGGCGGGGCC GGTCCTGCCC AAGGGCGAGA TGAAGGGCAC GGCCTGGATC
GCGGCCTACG AGGATCGCAA CGTGGATATC GGTCTGGCCT GCGGGCTCAA GGGTCGGGCG
CAGATCGGCA AGGGCATGTG GGCGATGCCG GATTTGATGG CGGATATGCT GGAGGCCAAG
ATCGGGCACC CGATGTCGGG GGCGAACTGT GCCTGGGTGC CGTCGCCGAC CGCGGCCACG
CTGCACGCGA CCCATTACCA CAAGGTGGAT GTGTTCGCGC GGCAGGACGA GATTGCCGCG
GGCGGGGCGC GCGGGACGCT GGAGGACTTG CTGACCATTC CCTTGCTCGA AGGCCGCAGC
CTGAGCGCGG CGGAGATTGC GGCGGAGGTC GAGAACAACG CGCAGGGCAT TCTCGGCTAT
GTTGTGCGGT GGATCGACCA GGGGGTGGGC TGCTCCAAGG TGCCGGATAT CCATGATGTG
GGACTGATGG AGGACCGGGC GACCTGCCGG ATCAGTTCGC AGGCGCTGGC CAACTGGCTG
CATCACGGGA TCGTCTCGGA AGAGCAGGTG ATGGGGGCGC TGCGCAAGAT GGCCGCGGTG
GTCGATCAGC AGAACGCGGG CGATCCGGCT TACCGGCCCA TGGCGCCCGG CTTCGACGGG
ATCGCGTTTG CGGCGGCCTG CGACCTGGTG TTCGCCGGGC GGGAGCAGCC TTCGGGCTAT
ACCGAGCCGG TGCTGCATGC GCGGCGGCTG GAGCTGAAGG CCGCGCTGGT CGCGCCCGAG
GCGCTCAGGG CCTGA
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| Protein sequence | MKRVERAGLQ VAPELVEFLE TQALPGTGVT AAAFWEGLSA LVHEEGPTNR ALLAKRTELQ
RKIDAWHVAR KGQPHDAAAY AAFLREIGYL VPEPEDFEID TANVDPEIAT IPGPQLVVPI
TNARYALNAA NARWGSLYDA LYGTDALGDL PSGKGFDPER GARVMAWARD HLDHAAPIAG
VSWADVTRID VADGALELVA GDLRPLVDPA QFAGYTTGPA GDVTSVLLRK NGLHLRVMID
PTSRIGAADP AGISDVIIEA AISAIMDCED SVAAVDAEDK VLAYGNWLGL MKGDLSQEVT
KGGKSFTRAL ARDVVATAPN GDRLVLKGRA LMLVRNVGHL MTNPAILDRD GAEIGEGLMD
AMVTTLIAMH DLGRAGGNSV HGSVYVVKPK MHGPEEVAFT DRIFTRVEAA LGLPANTVKI
GIMDEERRTS ANLKACIHAA RSRVAFINTG FLDRTGDEIH TSMEAGPVLP KGEMKGTAWI
AAYEDRNVDI GLACGLKGRA QIGKGMWAMP DLMADMLEAK IGHPMSGANC AWVPSPTAAT
LHATHYHKVD VFARQDEIAA GGARGTLEDL LTIPLLEGRS LSAAEIAAEV ENNAQGILGY
VVRWIDQGVG CSKVPDIHDV GLMEDRATCR ISSQALANWL HHGIVSEEQV MGALRKMAAV
VDQQNAGDPA YRPMAPGFDG IAFAAACDLV FAGREQPSGY TEPVLHARRL ELKAALVAPE
ALRA
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