| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1225 |
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| Symbol | |
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| ID | 5711783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1267586 |
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| End bp | 1269130 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641267137 |
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| Product | deoxyribodipyrimidine photo-lyase |
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| Protein accession | YP_001532568 |
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| Protein GI | 159043774 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.474608 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.333965 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGATC CCGCCCCCAT CCTTGTCTGG TTCAAGCGCG ACCTGCGCGT GGCCGATCAC
CCGGCGCTGG CGCGGGCGGC CGCACTTGGG CCTGTCCTGC CGGTTTACAT CGTGGAGCCG
GAGTATTGGC AGCTTCGGGA CGTCTCGGCG CGGCAGTGGG CGTTCACGCG GGAATGTGTG
GCGGACCTGT CGCGGGAGCT TGCGGCGCTG GGCGCGCCCT TGCGGATCGA GACCGGAGAG
GCGGTCGCGG TGCTGGAGCG GCTGCGCGCC GCGCACGGGA TCACCCTGAT GATCAGCCAT
GAGGAGATCG GCAATGGCTG GACCTATGCC CGCGACCGGG CAGTGGCCGA TTGGGCGCGG
GCGCAGGGCG TGGCCTGGGA GGAGTTGGCG CAATCCGGGG TCGTGCGGCG GCTGAACGGG
CGGGACGGCT GGGCGCGTAC GCGGGACCGG TTCATGGCAC AGCCGCAGGT GGCGGTGCCC
GTGCTGCGCG GTGTCGACGG CGGGGGCGGG GCCTTGCCCG ATGCGGCCGC GCTGGGCCTT
GCCGACGATC CCTGCCCGGG GCGGCAGCGC GGCGGGCGGG ATGAGGCCTT GTCCCTGTTG
GGCGGGTTTC TGACCGAGCG GGGCCGGACC TACCGCGCGG CGATGGCCAA TCCGCTGGAC
GGGGCGGAAG CGTGCTCGCG CCTGTCGCCG CACCTGGCGC TCGGCACCCT GTCGGGGCGG
GAGGCGGTTC AGGCGGCGGC AATGCGCAAG GCCGAGGTGA AGGGCACGCG GGACGGCTGG
ATCGGGGCGA TGAAGAGCTT CGAGGCGCGG CTCGCCTGGC GCGATCACTT CATGCAGAAG
CTGGAGGATG CGCCGCGGCT GGAGCATGCG TGCCTCCATT CGGCTTATGA GGGGTTGCGG
CCCGCGGTGC CGGACCCGGT GCGGCTGGGG GCCTGGGCCA AGGGGGAGAC GGGATTGCCC
TTCGTCGATG CCTGCATGCG GTCGCTGATC GCCACGGGGT GGCTGAATTT TCGGGCGCGC
GCGATGCTGG TGGCGGTGGC GTCCTATCAC CTGTGGCTGG ATTGGCGCGC CTCCGGCACG
ATCCTGGGGC GGTATTTCAC CGATTTCGAG CCGGGGATTC ACTGGCCGCA GGTGCAGATG
CAGTCGGGCA CCACGGGGAT GAACACGGTG CGGATCTACA ACCCGGTCAA GCAGGGGCAT
GACAACGACC CCGAGGGCGT GTTCACCCGC CGCTGGCTGC CGGAACTGGC GGAAGTTCCG
GACCGGTACC TGCAGGAGCC CTGGCGCTGG GAGGGGGCGG ACAGCGTGCT GAACCGGACC
TATCCCGCGC CGATCGTGGA GCCCAAGGCC GCGGCGGCAG CGGCCCGCGA CAAGGTCTGG
GCCGTGCGGC GCGGAGAGGC GTTTCGCAGC GAGGCCGCCC GGGTGGTCGA AAAGCACGCC
AGCCGGAAGG ACGCGCAGGG GCGGTTCGTC AATGACCGCG CCCCGCGCAA GACCCGCCGC
CGGGCGCCGA AGGCCCCGCC GGGGCAGATG AGCCTCGACC TGTGA
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| Protein sequence | MTDPAPILVW FKRDLRVADH PALARAAALG PVLPVYIVEP EYWQLRDVSA RQWAFTRECV
ADLSRELAAL GAPLRIETGE AVAVLERLRA AHGITLMISH EEIGNGWTYA RDRAVADWAR
AQGVAWEELA QSGVVRRLNG RDGWARTRDR FMAQPQVAVP VLRGVDGGGG ALPDAAALGL
ADDPCPGRQR GGRDEALSLL GGFLTERGRT YRAAMANPLD GAEACSRLSP HLALGTLSGR
EAVQAAAMRK AEVKGTRDGW IGAMKSFEAR LAWRDHFMQK LEDAPRLEHA CLHSAYEGLR
PAVPDPVRLG AWAKGETGLP FVDACMRSLI ATGWLNFRAR AMLVAVASYH LWLDWRASGT
ILGRYFTDFE PGIHWPQVQM QSGTTGMNTV RIYNPVKQGH DNDPEGVFTR RWLPELAEVP
DRYLQEPWRW EGADSVLNRT YPAPIVEPKA AAAAARDKVW AVRRGEAFRS EAARVVEKHA
SRKDAQGRFV NDRAPRKTRR RAPKAPPGQM SLDL
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