| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1217 |
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| Symbol | |
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| ID | 5711775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1256903 |
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| End bp | 1258444 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641267129 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001532560 |
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| Protein GI | 159043766 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.335283 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCAGA CAGTCTCTGA GCTGATTGCC ACTCATCCGG ATGCAGCACC CGCCATCGGC
GCCCCGGACC GGGGCTGGCT CGATTATGCC GGGCTGCGCG CCCAGACCGA GGCGACCCGG
GCCGCGCTGC ATGCCGCCGG TGTCGGGCGC GGCGACCGGG TGGCGATCGT GCTGCCCAAC
GGGCCGGAGA TGGCGTCGGC CTTCGTGACA ATCACGCAGG TGGCCACGAC CGCGCCGCTG
AACCCGGCCT ATCGGCAGGA AGAGTATGAA TTCTACCTCA GCGACCTGAA CGCCAAGGCC
ATCGTGCTGG CCGAGGGCTA TGACGGCCCG GCGCTGGCCG CGGCGCAGAC CACGGGCCTG
ACCGTGCTGC GGCTGTCCTT CGATCCGGCG CGGCCCGCGG GCACCTTCAC CCTGACCGCC
GAAGCCAGCG CGGGCGAGGC AGATACCGCC GCCCCGGAGG CCGGCGATGT GGCGCTGATC
CTGCACACCT CGGGCACCAC CTCGCGGCCC AAGATCGTCC CGCTGTTGCA GTCGAACGTG
GCGGCCTCGG CGGCCAATAT CCGCGCCTCG CTGGACCTGA CGGCCGCGGA CCGCTGCATG
AACGTCATGC CGCTCTTCCA TATCCACGGG CTGATCGCAG CCGTGTCCGC GTCGCTCGAG
GCGGGCGCGT CGATCTGGTG CACCCCGGGC TTCAACGCGC TTGCGTTCTT CGGCCAGCTC
GATGATTGCA AGCCCAGCTG GTACACCGCA GTGCCGACCA TGCACCAGGC GATCCTGACC
CGGGCGGGCC GCAACGCGGA GATCATCGCG CGCGCGAACC TGCGCTTCCT GCGGTCCTCC
TCGGCGTCCT TGCCGCCGCC GGTGATGGCC GAGTTGGAGA AGACCTTCGG CGCGCCGGTG
ATCGAGGGCT ACGGGATGAC CGAGGCCGCG CACCAGATGT GCTCCAACCC GCTGGGCTTC
GACACGCAGA AGCCCGGCTC CGTCGGCGTG CCCGCCGGTC CACAGGTCCG CATCGCCCAC
GAGGCCGAGG ACCGGCTGAT CGACAGTTCC GAGATCGGAG AGGTCGTCAT CTCTGGCCCG
AACGTCACCC CGGGCTACGA GGGCAACCCG GAGGCCAACG CCAAGAGTTT CTTCGAGGCC
GAGGGCGCGC GCTGGTTCCG CACCGGCGAC CAGGGGGCGT TCGACGCAGA TGGCTACCTG
TCCCTGACCG GGCGGCTGAA GGAGATCATC AACCGCGGCG GCGAAAAGGT CAGCCCGCTG
GAGGTGGACG CGATCCTGCT GGACCATGCC GAGATCGCGC AGGTCGTCAC CTTCGCCCTG
CCCCACCCCA AGCTCGGCGA GGAGGTCGCG GCGGCCGTGG TGCTGACCGA AGGGTCCACA
ATGACCGAGC GCGATATCCG CGATTTCGCC GCCTCGCGGC TTGCGGATTT CAAGGTGCCG
CGCAAAGTGG TGATCCTGGA CGAGCTGCCC AAGGGCGCCA CGGGCAAGAT CCAGCGCATC
GGCATGGCCG AGAAGCTGGG CCTGATCGAG CAGGCCGCCT GA
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| Protein sequence | MAQTVSELIA THPDAAPAIG APDRGWLDYA GLRAQTEATR AALHAAGVGR GDRVAIVLPN
GPEMASAFVT ITQVATTAPL NPAYRQEEYE FYLSDLNAKA IVLAEGYDGP ALAAAQTTGL
TVLRLSFDPA RPAGTFTLTA EASAGEADTA APEAGDVALI LHTSGTTSRP KIVPLLQSNV
AASAANIRAS LDLTAADRCM NVMPLFHIHG LIAAVSASLE AGASIWCTPG FNALAFFGQL
DDCKPSWYTA VPTMHQAILT RAGRNAEIIA RANLRFLRSS SASLPPPVMA ELEKTFGAPV
IEGYGMTEAA HQMCSNPLGF DTQKPGSVGV PAGPQVRIAH EAEDRLIDSS EIGEVVISGP
NVTPGYEGNP EANAKSFFEA EGARWFRTGD QGAFDADGYL SLTGRLKEII NRGGEKVSPL
EVDAILLDHA EIAQVVTFAL PHPKLGEEVA AAVVLTEGST MTERDIRDFA ASRLADFKVP
RKVVILDELP KGATGKIQRI GMAEKLGLIE QAA
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