| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1209 |
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| Symbol | coxC |
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| ID | 5711767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1247697 |
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| End bp | 1248803 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641267121 |
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| Product | putative integral membrane sensor protein |
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| Protein accession | YP_001532552 |
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| Protein GI | 159043758 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3300] MHYT domain (predicted integral membrane sensor domain) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.131047 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.490878 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTCGATT TTTCCCATAA CCCGTGGTTG GTCGCGGCCT CCCTGGCGGT TGCGCTGATG
GCGGGCTTCA CCGGGCTGTC CCTGACCAAG GGCGCCTCGA CCTTGCCCGC GGGGCCGCGC
AAGACGCGGG TGGCGATGGC GTCTGTCGCC TTGGGCGGCG GCATCTGGGC CATGCATTTC
GTCGCGATGC TGGGCCTGCA ACTGCCGATC CTGTTCTACT ACGACCCGCT GATCACCCTG
ATCTCGGCGC TGGTGGCGAT CCTGATCGTC GGCGTGGCGT TGCTGGTGCT GCATTTCCTG
CCGCGCCGCG CGCTGACGAT CTCGGCGGCG GGGCTTTGTG TCGGGTTGGG CATTCCGGTG
ATGCATTATA TCGGCATGTC GGGGATGCGC TTGTGCCAGC CCAGCTATTC GGTCGCGGCG
GTGATGGAGG CGGGCGTGGC CTCGGTGGTT CTGTCCATGG GCGCGATCTG GATCGCTTAT
GGCGCGCGCA CCTACCGCAA CATCCTGCTC GGCACGCTGG GCTTCGGCTT TGCCGTCTTC
GCGGTGCATT TCGTCGCCAT GTTCGGCACC GATTTCAGCG CCGTGCCCGG GGCGGCGGCG
GCCGGCCCGT TGATCAGCAA CGCGACGCTT GCGCTGATCG TGGCGCTGAT CGCCTTCGTG
ATCTGCGGTG CGTTCCTGTT GTCCAGCGTC ACCCTGCTGC CACAGGCGGA GGCGCGCGCC
CAGGCCCCGG CGCCCGGGGC TGAGGCGGAA ATGCCCGCGC CGGAGGCGGA GATCCGGAAA
ATCCCCTATG AGCTCGATGG TCGGACATTC TTCATCGACA GCCGCCAGGT CGCGGCGATC
CGGGCCGAGG GCCATTACAC CGTCCTTTAC CAGGACGAGC GCAAGCTTTT CTGCCCCTGG
TCGATCTCCG AGGCCGAGGC GCGGCTGCCC CGGGGGCAGT TCGTCCGCGC CCATCGCAGC
TACCTCGTCA ATCCGGGCCA TGTCACCGGG TTCGAGCGCA AGAAGGACAA CGGGGTGGTG
TTCTTCGACG CGCGCAGCGC GCTGGAAAAA GTCCCCGTGA GCCGCTCGCG CCTGCAGGAC
GTGCGCACGG CCCTCGGCCT CGTCTGA
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| Protein sequence | MLDFSHNPWL VAASLAVALM AGFTGLSLTK GASTLPAGPR KTRVAMASVA LGGGIWAMHF
VAMLGLQLPI LFYYDPLITL ISALVAILIV GVALLVLHFL PRRALTISAA GLCVGLGIPV
MHYIGMSGMR LCQPSYSVAA VMEAGVASVV LSMGAIWIAY GARTYRNILL GTLGFGFAVF
AVHFVAMFGT DFSAVPGAAA AGPLISNATL ALIVALIAFV ICGAFLLSSV TLLPQAEARA
QAPAPGAEAE MPAPEAEIRK IPYELDGRTF FIDSRQVAAI RAEGHYTVLY QDERKLFCPW
SISEAEARLP RGQFVRAHRS YLVNPGHVTG FERKKDNGVV FFDARSALEK VPVSRSRLQD
VRTALGLV
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