| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1198 |
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| Symbol | |
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| ID | 5711966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1238964 |
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| End bp | 1239965 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641267109 |
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| Product | beta-lactamase |
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| Protein accession | YP_001532541 |
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| Protein GI | 159043747 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.98564 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.588017 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCACAC GACGCACGGC CCTCGCCTTT TCCACCGCCG CGCTGCTGGC CGGCCCGGCT
CGCGCCAATG GCACCGACTG GACCCGCGTG CGGGACCGCG CGCGGGGGCT GGACCAGTTG
CACAGCCTGA CCGTGGCCCA GGGCGGTACG GTCGTCCTGG CCGAGGCGCT GCGCGGCCCG
GCCCTGTCGC GGGCGGTGCC GATCAAGTCG GTGTCGAAAT CCCTCGTGGC CCTCCTGCTG
GGGGCGGCCA TCGACCGGGG CGAGATCGCG GGCGTGGACG CCACCCTGGC CGAGGTCGCG
CCGCAGTTGA TCCCCGCAGG CGCCGACCCG CGGGTGCCCG ACCTGACCAT GGCCGACCTC
GTGACCATGC AGGCGGGGCT GGAGCGGACC TCGGGCGCCA ATTACGGCGG CTGGGTGTCG
AGCCGGAACT GGGTCGCCAA TGCCCTGAGC CGCCCGATGG TGGCCACGCC GGGGCAAGGG
ATGCTCTATT CCACCGGGTC GTTCCATATC CTCGGCGCAG CCCTGGCCGA GGCGACGGGC
CTGTCGCTGC TGGCCCAGAT GCGCCGCCGG ATCGGCGCGC CACTCGGCAT CGACATTCCC
GCCTGGACCC GCGACCCGCA AGGCTACTAC CTGGGCGGCA ACGAGATGTC CCTGCGCCCC
CGCGACCTGC TGGCCATCGG CGAGATGGTG CGTCTGGGCG GGGCAGCCGA GGGCGGTCAG
GTGATCAGCA ACGGCTGGCT CAGCGCCTCG GCCATCCCGC GCACGCAATC GCGGTTCTCC
GGGCTGGGCT ATGGCTATGG CTGGTTCTTG GGGCGTGCAG ACGGGGCGGA GTTTCTTCTG
GCGCGCGGCT ATGGGGGCCA GATCCTGTGC ATCGTGCCGG ACCGCGCCCT GACGCTCGTG
ATCACCTCGG ACCCGACGCG TCCTGCCCGT TCGGGCGGCT ATTTCGGCGA CCTGATGGCC
CTGCTGGACG ACGCGATCCT GCCCGCCGCC CGCGCGGCGT GA
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| Protein sequence | MITRRTALAF STAALLAGPA RANGTDWTRV RDRARGLDQL HSLTVAQGGT VVLAEALRGP
ALSRAVPIKS VSKSLVALLL GAAIDRGEIA GVDATLAEVA PQLIPAGADP RVPDLTMADL
VTMQAGLERT SGANYGGWVS SRNWVANALS RPMVATPGQG MLYSTGSFHI LGAALAEATG
LSLLAQMRRR IGAPLGIDIP AWTRDPQGYY LGGNEMSLRP RDLLAIGEMV RLGGAAEGGQ
VISNGWLSAS AIPRTQSRFS GLGYGYGWFL GRADGAEFLL ARGYGGQILC IVPDRALTLV
ITSDPTRPAR SGGYFGDLMA LLDDAILPAA RAA
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