| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1192 |
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| Symbol | holC |
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| ID | 5711960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1230035 |
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| End bp | 1230490 |
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| Gene Length | 456 bp |
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| Protein Length | 151 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641267103 |
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| Product | DNA polymerase III subunit chi |
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| Protein accession | YP_001532535 |
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| Protein GI | 159043741 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2927] DNA polymerase III, chi subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.369571 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.290389 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGGCGCGG TCTATTTCTA CCACATGACG CGGACGCCGC TGGACGCGAC CTTGCCGGTG
CTGCTGGAGA AATCCCTCGC CGCGGGCTGG CGGGTGCTGG TGCGCGGCAC AAGCGGGGCA
GAGTTGGAGC GGCTCGACGA GCTGCTCTGG CTGCGGCCCG AGGAGGGGTT TCTGCCCCAC
GGGATCGCGG GCGGGGACCG GGACGCGGAT CAGCCGGTGC TGCTGGGGGT GGATGCGCCG
CTGGCGGGGC GCGAAGCGCT GATCTGCGTG GACGGGGCGC AGGTCGACCC GGCGGAGGTG
GCCGGGCTGG CGCGCGCGTC GCTGCTGTTC GATGGCGGGG ACGCCGCGGC GGTGGAGGCC
GCGCGGGGCC AGTGGCGGGC GGTCACGGGC GCGGGGCTGT CGGCGCAGTA CTGGAGCCAG
GAATCCGGTC GGTGGGAGAA AAAGGCCGAA GCCTGA
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| Protein sequence | MGAVYFYHMT RTPLDATLPV LLEKSLAAGW RVLVRGTSGA ELERLDELLW LRPEEGFLPH
GIAGGDRDAD QPVLLGVDAP LAGREALICV DGAQVDPAEV AGLARASLLF DGGDAAAVEA
ARGQWRAVTG AGLSAQYWSQ ESGRWEKKAE A
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