| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1172 |
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| Symbol | prfB |
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| ID | 5711940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1204202 |
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| End bp | 1205329 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641267083 |
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| Product | peptide chain release factor 2 |
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| Protein accession | YP_001532515 |
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| Protein GI | 159043721 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1186] Protein chain release factor B |
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| TIGRFAM ID | [TIGR00020] peptide chain release factor 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.073088 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCAG AGATCCAGAA CACCGTCGAA GCGATCCGCA AATCGCTGGA CCTTCTCGCT
CAGCGGCTCG ATTACGAGAC CGCGCCGCAC CGGCTCGAAG AATTCGACGC GATGATCGAG
GACCCGAACC TCTGGAACGA TCAGGCCCGC GCCCAGAAGC TCATGCGCGA CCGCCAGATG
CTTGTCGATG CCATGAAGAC CTACGAGGGC ATCAAGCAGG AGCTCGAAGA CAATATCGAG
CTGATCGAGC TGGGCGAGAT GGAGGCGGAC GCGGAGGTCG TCACCGACGC AGAGGAGGCG
CTCAAGTCCC TCGCCGAGAC CGCCGCCAAA AAGGAGATCG AGGCGCTGCT GGATGGCGAG
GCCGACGGCA ACGACACGTT CCTGGAGATC AACTCGGGGG CAGGGGGCAC CGAGAGCTGC
GACTGGGCCT CGATGCTGGC GCGGATGTAT GTCCGCTGGG CCGAGGCCAA GGGCTACACC
GTGGAGTTGC AATCCCAGAG CCCCGGCGAA GAGGCCGGGA TCAAGTCCGC GGCCTACAAG
ATCAGCGGGC CCAACGCCTA TGGCTGGCTG AAATCGGAAT CCGGTGTCCA CCGGCTCGTC
CGTATCAGCC CCTATGACAG CGCCGCGCGC CGCCACACCT CGTTCAGCTC GGTCTGGGTC
TACCCCGTGG TGGACGACAA TATCGAGATC GAGGTCAACC CGGCGGATAT CCGCATCGAT
ACCTACCGAT CCTCCGGTGC GGGCGGACAG CACGTGAACA CAACCGACTC GGCGGTACGC
ATCACCCATG TGCCCACGGG CATCGTCACC ACCAGTTCCG AGAAGTCCCA GCACCAGAAC
CGTGATATCG CCATGAAGGC GCTGAAATCG CGCCTCTACC AGATGGAGCT CGACCGCCGC
AACGCGGCCA TCAACGAGGC GCACGAGGCC AAGGGCGACG CGGGCTGGGG CAACCAGATC
CGCTCCTATG TGTTGCAGCC CTATCAGATG GTGAAGGATC TGCGCACGGG CTACGAGACC
TCGGATACCG CGGGCGTGCT CGACGGCGAT CTCGATGGGC TCATGTCTGC GACATTGGCC
CAGCAAGTTG CCGGAAAAAG TCGCAGCGAG GCGCAGGGCG CCGACTGA
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| Protein sequence | MRAEIQNTVE AIRKSLDLLA QRLDYETAPH RLEEFDAMIE DPNLWNDQAR AQKLMRDRQM
LVDAMKTYEG IKQELEDNIE LIELGEMEAD AEVVTDAEEA LKSLAETAAK KEIEALLDGE
ADGNDTFLEI NSGAGGTESC DWASMLARMY VRWAEAKGYT VELQSQSPGE EAGIKSAAYK
ISGPNAYGWL KSESGVHRLV RISPYDSAAR RHTSFSSVWV YPVVDDNIEI EVNPADIRID
TYRSSGAGGQ HVNTTDSAVR ITHVPTGIVT TSSEKSQHQN RDIAMKALKS RLYQMELDRR
NAAINEAHEA KGDAGWGNQI RSYVLQPYQM VKDLRTGYET SDTAGVLDGD LDGLMSATLA
QQVAGKSRSE AQGAD
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