| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1167 |
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| Symbol | |
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| ID | 5711935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1196727 |
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| End bp | 1198073 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641267078 |
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| Product | peptidase M48 Ste24p |
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| Protein accession | YP_001532510 |
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| Protein GI | 159043716 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.136165 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.923958 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAGCC GATGGTTCCA TCCCGCGGCC GTTCTCGTGA TTCTGGCGGG CCTGTGGCTC
CAGGCCCTGC CGGCGCAAGC GGTGACGCTG ATCCGCGATG CGGAGATCGA GCGGTCCCTG
CGCGAGCTGG CCACCCCCCT GATGGCGGCG GCGGGGGTGA ACCCGGCCCG GGTGGATATC
TGGGTGATCG AGGACAGCAA GCTGAACGCC TTTGTGGCGG ACCCGCAGAC CATCGTGATC
CATTCCGGGC TTCTGCTGCG GCTGGAGACC CCGCAACAGG TCCAGGCGGT GCTGGCCCAC
GAGTTGGCCC ATATCGCCAA CGGCCATATC TCGCGCCGGA TCGACAACAT GCGCGCGATG
AACCGGTTTG CGCGGATGGG CCTGATCCTG GCCGCGGCGG CGGGGGCGGC GACGGGCTCG
CCCGAGGCGG CGATCGGGCT GGGCGCTGGC GCCGCCGGGG CGGCAAGGCG GGCGTTTTTC
GGCCATACCC GCGCCGAAGA GGCCGCCGCC GACCGCAGCT CGATCCGCTA CATGACGAAT
GCCGGGGTCT CGCCCGTGGC GATGGTCGAG GTGCTCAACA TCTTCCGCGG GCAGGAGGCT
TTGTCGCCGG GGCGGCAGGA CCCCTACCTG CGCACCCACC CGCTGACCCG CGACCGGCTG
CGTGCCGCCG AAGGGTTCGC CGCGGCCAGC CCCCCCGCCC CCTCGGACCA GAGCGAGGCC
GCCTATTGGT ACGCCCGGCT GCAGGGCAAG CTGTCGGCGT TTCTGCGCAA CCCGGACTGG
ACCCTGCGGC GGGTGCCGCC CTCGGACCGC TCCGAGGTGG CGGTGATGCG ACGCGCCATC
GCCTATCACA AGAAACCCGA CCCGGACCGC GCCGCGCGGG AGGTCGAGGC GCTGCTCGCC
CTGCGCCCGG ACGACCCCTA CTACACCGCC TTGAAGGGCC AGTTCGCCTT CGAATCGCGA
CGCTACGATG CGGCGGTCGC GGCCTATGAA CGGGCGGTGT CGCTGGCCCC GCGCGAGCCG
CTGCTGCTGG CGCAGCTCGG CCGGGCCTAT CTCGCCCAGA ACACGGCCGC GTCCAACCGC
AAGGCGCTGG AGGTGCTGGC GGCGGCTTAC GGACGGGACG CGGGCAACCC CTCGCTGCTG
CGCGATCTGG CACAGGCCTA TGCCCGGGCA GGCCAGAACG GCATGGCGTC GGTCACCACG
GCAGAGCGGC ACGCGATGTC GGGCCGGGTC TCGGACGCAG GGCTGCAGGC CCGGCGCGCC
ATGGCGCTGC TGCCCCAGGG CAGCCCGGGC TATGCCCGCG CCCGCGACAT CCTGCGCACC
GCCGAGCAGG CAGAGGCGCG GCGCTAG
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| Protein sequence | MRSRWFHPAA VLVILAGLWL QALPAQAVTL IRDAEIERSL RELATPLMAA AGVNPARVDI
WVIEDSKLNA FVADPQTIVI HSGLLLRLET PQQVQAVLAH ELAHIANGHI SRRIDNMRAM
NRFARMGLIL AAAAGAATGS PEAAIGLGAG AAGAARRAFF GHTRAEEAAA DRSSIRYMTN
AGVSPVAMVE VLNIFRGQEA LSPGRQDPYL RTHPLTRDRL RAAEGFAAAS PPAPSDQSEA
AYWYARLQGK LSAFLRNPDW TLRRVPPSDR SEVAVMRRAI AYHKKPDPDR AAREVEALLA
LRPDDPYYTA LKGQFAFESR RYDAAVAAYE RAVSLAPREP LLLAQLGRAY LAQNTAASNR
KALEVLAAAY GRDAGNPSLL RDLAQAYARA GQNGMASVTT AERHAMSGRV SDAGLQARRA
MALLPQGSPG YARARDILRT AEQAEARR
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