Gene Dshi_1159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1159 
Symbol 
ID5711927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1185626 
End bp1186144 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content68% 
IMG OID641267070 
Producthypothetical protein 
Protein accessionYP_001532502 
Protein GI159043708 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAGTC ACACGGACAT CATTGATTTC AGGTATCATG CGGCGCGCAA AGCGGCGTCG 
AGATTGGCGG GTTCCATGGA ATGGCAAGTA CCGGGCTTCG GACCGGAGAC GCGGATCATG
ACAACGCTGG GCGCGATCCC CGCCGGTCTG CTGCGGCGCG GGGACGAGGT GATCACGCCC
TCGGGACTGT CATGTGGGAT CGAGTGGCTC GACCGGGTCG GGCTGGATGC GGATTTCCTG
GCCAGTCACC CGAACGCGCA TCCGCGCGTC ATCCCGGCCG GGAGCCTGGG GGCCGGGTTG
CCCGAGCGGG ACCTGGTCGT CTCGGCCGGT CAGCAGATGA TGCCCGGCAA GACCACGCGC
GCGACCCCGG GGCTGCCCCT GCCGCCGGAG GCGGTATGCA AGGTGCACGG GTTTCAATAT
ACCCTGTTCC ATTGCGGCCG CCCGGTGCAG GTGCTGGCCG AAGGGGTCTG GTGCCCGGTG
GACGAGCTGT CGAGCCTGCG CGGACGCCGC AGCGCCTGA
 
Protein sequence
MRSHTDIIDF RYHAARKAAS RLAGSMEWQV PGFGPETRIM TTLGAIPAGL LRRGDEVITP 
SGLSCGIEWL DRVGLDADFL ASHPNAHPRV IPAGSLGAGL PERDLVVSAG QQMMPGKTTR
ATPGLPLPPE AVCKVHGFQY TLFHCGRPVQ VLAEGVWCPV DELSSLRGRR SA