| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1138 |
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| Symbol | |
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| ID | 5711106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1165063 |
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| End bp | 1166202 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641267049 |
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| Product | DNA protecting protein DprA |
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| Protein accession | YP_001532481 |
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| Protein GI | 159043687 |
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| COG category | [L] Replication, recombination and repair
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake |
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| TIGRFAM ID | [TIGR00732] DNA protecting protein DprA |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.823359 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAGG ATATCGCGCC GCTCTTTCCC GATGATGACA CCCCGCAGGC GCCCCGCTCC
GTGGACGAGG CGCTGGATTG GCTGCAACTG ATCCGCAGCC CCCGGGTCGG TCCCGTCACG
TTTCACAAGC TTCTTGCCGA ATACGGCACT GCGCGCGCAG CGCTCGATGC GCTGCCCGAG
GTCGGTTCGG CGGCTGGGCT GAAGGATTTG CGCCCGATCG CGCGCGACCG GGTCGAAAAG
GAATACACCA CCGGGCGCAA GATGGGCGCG CGGCTCGCGG CCCTGGGCGG GACGCTCTAC
TCGGACCGGC TGTCCAGCAT CGACGACGCA CCACCGCTTC TGTGGTGCCT TGGCGATGTC
GAATTGCTCA AACGCTCCGC CGTGGCCCTC GTGGGGGCGC GCAATGCCTC GGCCATCGGC
CAACGTCTGG CCCGCGCCTT TGCCAAGGGG CTGGGCAGCG AGGATCAGGT GATCGTATCG
GGGCTGGCAC GCGGGATCGA TGCCGCCGCC CATGACGCCG CGATCGACAC GGGCACCATC
GCCGTGGTCG CGGGCGGGCT CGACGTGATC TATCCCAAGG AAAATACCGA GCTGTTCAAG
CGCATCGCCA AGCAGGGACT GATCGTGTCG GAACAACCGC TCGGCATGCA GCCCCAGGCG
CGGCATTTCC CGCGCCGCAA CCGGCTGATT TCCGGCCTGG CGCGCGCGGT GGTAGTGGTC
GAGGCGACCG TGAAATCGGG CAGCCTGCTG ACCGCGCGGG ATGCCGCCGA CCAGGGGCGG
GAGGTGATGG CCGCCCCCGG GCACCCGTTC GACGGGCGCG CGTCGGGATG CAACCAGTTG
CTGCGCGATG GCGCGACCCT GGTGCGCAAT GCCGAGGACA TCCTGCTGGC GCTTTCGCCA
GAGGCCGCAG CGCCATCGCC GGAGCCCGCC GCCGCACCTG CGCCGGAGCT TGGCCGGCCC
TCCGCGGACG AGTTGCGCGG TCGCGTTCTG GCCACGCTCG GCGCCACGCC GCTGCCCGAG
GATCAGGTCA TTCGCGCCCT CGGTCTGCCC GCGGCGCAAG TCAATGCGGC CCTGGTGGAG
TTGGAGATGT CCGGTCAGAT CACCCGCGCC CCCGGGGGAA TGCTGAGCCT CGGGTGCTGA
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| Protein sequence | MAKDIAPLFP DDDTPQAPRS VDEALDWLQL IRSPRVGPVT FHKLLAEYGT ARAALDALPE
VGSAAGLKDL RPIARDRVEK EYTTGRKMGA RLAALGGTLY SDRLSSIDDA PPLLWCLGDV
ELLKRSAVAL VGARNASAIG QRLARAFAKG LGSEDQVIVS GLARGIDAAA HDAAIDTGTI
AVVAGGLDVI YPKENTELFK RIAKQGLIVS EQPLGMQPQA RHFPRRNRLI SGLARAVVVV
EATVKSGSLL TARDAADQGR EVMAAPGHPF DGRASGCNQL LRDGATLVRN AEDILLALSP
EAAAPSPEPA AAPAPELGRP SADELRGRVL ATLGATPLPE DQVIRALGLP AAQVNAALVE
LEMSGQITRA PGGMLSLGC
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