Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1117 |
Symbol | |
ID | 5711085 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 1142513 |
End bp | 1142929 |
Gene Length | 417 bp |
Protein Length | 138 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641267028 |
Product | thioesterase superfamily protein |
Protein accession | YP_001532460 |
Protein GI | 159043666 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.692478 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGCAG AGATCGAAAC CCGCATCGCC GAAAGCTTCG CGCGCCAGGG CCTCATGGGC AGTTTTGGTG CAGAGATCCT ATCGGTGAGC GCGGGCCACG TGGTCCTGCA AGCCCCGATC CGTTCGGCAG CGCAGCAGCA GCACGGCTTC GCCCATGCAG GGCTGACCTT CGCGCTGGGA GACAGTGCCG CGGGCTACGC CGCGCTGACC ACCATGCCGC CGGACCGCGA AGTGGTGACA TCGGAGATGA AGATCAATCT GCTCGCCCCC GGCAAGGGCG CGTTCCTGCG CGCCGAAGGC CGTGTCATCC GCGCGGGCAA GCGGCTGGTG GTGGTCACGG CGGAGGTCTT TCGCGACGAT GGCGAGATGG TCGCCCTGAT GCAGGGGACC ATGATACCTG TATCCGCTAC GGCCTGA
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Protein sequence | MTAEIETRIA ESFARQGLMG SFGAEILSVS AGHVVLQAPI RSAAQQQHGF AHAGLTFALG DSAAGYAALT TMPPDREVVT SEMKINLLAP GKGAFLRAEG RVIRAGKRLV VVTAEVFRDD GEMVALMQGT MIPVSATA
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