| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1110 |
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| Symbol | tolA |
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| ID | 5711078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1134607 |
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| End bp | 1135662 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641267021 |
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| Product | hypothetical protein |
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| Protein accession | YP_001532453 |
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| Protein GI | 159043659 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5373] Predicted membrane protein |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00592448 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.281955 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTGCGCC TGCCGCATAT CGAGACCGGG ACCTATATCT CCGGCGCGGG GCATCTGGCG
CTCTTGGCCT GGCTCGCCCT GGGCGGACTT TTTTACTCCG CGCCCGAATT GCCGGTGCCT
TCGGCGGCTG ATGTCGTGTT GTTCAGCGAG GCGGAGTTTG CCGCGATGAC CCGGGCGCCG
GAGGTTGCCG AGCCCGCGCC CGCGCCACCC CCCGTGCCCG CGCCGGCCCC AGAACCCGCC
CCACCCCCCG AACCTGCGCC AGCGCCGGAA CCCGTCCCGC AGCCGGAACC CGAACCCGTG
CCGATCCCCG AGCCGGAGCC CGCGCCGCCG CCCCCGGCAG AGCGCGTGGC ACCCGAGCCC
GTGCCGCAGC CCGAGCCGGA GGCGCAGGTC GCGCCAGAAC GGCAGGAGGC CGTCACCCCC
GACAATTCCG GGGCCGAGGC CGTGCCTGCG GAAGAGGCCA CGGCCCCCGA GGCCGCGACC
ACACGCATTA TCACCGAGGC GACCGAGACC GATCCCGAAA GCCAGGCCCC GGACTTGATC
GCCAGCCCGC GCCCCTCGGC GCGTCCCGAC CGCCCCCGGC CCGTGCCGGT GGAGGCCCCG
CCCACACCCG AAGCGCCGCC GGAAACGCCC GCCGAGACTG CGCCGGACCC GGTCGCCGAT
GCGGTCGCGG CTGCCGTGGC AGAGGCCGCG GAGACCCCGA GCGCGGTGAG CCGCCCGGAT
GTGCCCGTCG GTCCGCCACT CACCGCGTCC GAACGGGACG GTCTGCGCGT CGCTGTTCAG
CAATGCTGGA ACGTGGGTTC GTTGTCGTCG GATGCGCTGC GCACCACGGT CACGGTCGCA
GTGGAGATGG AGCAATCGGG CCGCCCCGTG ATCAATTCCA TCCGCATGAT CGGCTCCGAA
GGCGGCTCGG ACGCGGCGGC GCGCCAGGCC TTCGAGACGG CACGCCGGGC AATCATCCGC
TGCGGCAGCG CCGGTTTCGA TCTGCCGGTT GAGAAATATG CCCAGTGGCG CGATATCGAG
ATGACATTTA ACCCCGAAAG GATGCGGATC CGATGA
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| Protein sequence | MVRLPHIETG TYISGAGHLA LLAWLALGGL FYSAPELPVP SAADVVLFSE AEFAAMTRAP
EVAEPAPAPP PVPAPAPEPA PPPEPAPAPE PVPQPEPEPV PIPEPEPAPP PPAERVAPEP
VPQPEPEAQV APERQEAVTP DNSGAEAVPA EEATAPEAAT TRIITEATET DPESQAPDLI
ASPRPSARPD RPRPVPVEAP PTPEAPPETP AETAPDPVAD AVAAAVAEAA ETPSAVSRPD
VPVGPPLTAS ERDGLRVAVQ QCWNVGSLSS DALRTTVTVA VEMEQSGRPV INSIRMIGSE
GGSDAAARQA FETARRAIIR CGSAGFDLPV EKYAQWRDIE MTFNPERMRI R
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