| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1108 |
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| Symbol | tolQ |
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| ID | 5711076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1133433 |
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| End bp | 1134107 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641267019 |
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| Product | Tol-Pal system TolQ |
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| Protein accession | YP_001532451 |
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| Protein GI | 159043657 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0811] Biopolymer transport proteins |
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| TIGRFAM ID | [TIGR02796] TolQ protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.00793891 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.562288 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACACCCG AGATAGACTT CTCGTTTCTC GCGCTTTTCG CGCGTGCGAC CCTGACCGTG
CAACTGGTGA TGATCCTCTT GATCGGGATG TCCTTCTGGT CCTGGTCGAT CATCATTCAG
AAATGGATCA CCTTCCGCAA GGCGCGGGCC GAGGCCGAGG CGTTCGATGC CGCCTTCTGG
TCGGGCGATC CGCTCGACGA CCTGTTCGAC GAGATCGGAC CGACACCCGA TGGCGCGGCG
CAGCGGGTTT TCGCCTCGGG CATGACGGAA TGGCGGCGCT CGCACCGCGA CACCGGGGAT
CTGATCCCCG GGGCGCAGCA GCGGATAGAC CGGTCCATGG ACGTGGCCAT CGCCAAGCAG
AGCGAGCGTT TGCAGAACGG GCTCAACTTC CTCGCGACCA CCGGGGCGAC GGCGCCCTTC
ATCGGCCTGT TCGGCACGGT CTGGGGCATC AAGCACAGCT TCGAGCAGAT CGCGATCCAG
CAGAACACCA ACCTCGCCGT GGTGGCACCG GGCATCGCCG AGGCGCTGCT GGCGACGGGG
CTGGGGCTCT TGGCGGCGAT CCCGGCGGTG GTGGCCTATA ACAAGCTGTC GGCGGATGCG
GACCGGATCG TGGGTGGCTA CGAGGCCTTT GCCGACGAGT TCGCAACGCT CCTGTCGCGG
CAGTTGGACG CCTGA
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| Protein sequence | MTPEIDFSFL ALFARATLTV QLVMILLIGM SFWSWSIIIQ KWITFRKARA EAEAFDAAFW
SGDPLDDLFD EIGPTPDGAA QRVFASGMTE WRRSHRDTGD LIPGAQQRID RSMDVAIAKQ
SERLQNGLNF LATTGATAPF IGLFGTVWGI KHSFEQIAIQ QNTNLAVVAP GIAEALLATG
LGLLAAIPAV VAYNKLSADA DRIVGGYEAF ADEFATLLSR QLDA
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