| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1104 |
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| Symbol | ruvA |
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| ID | 5711072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1130489 |
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| End bp | 1131163 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641267015 |
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| Product | Holliday junction DNA helicase RuvA |
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| Protein accession | YP_001532447 |
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| Protein GI | 159043653 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0632] Holliday junction resolvasome, DNA-binding subunit |
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| TIGRFAM ID | [TIGR00084] Holliday junction DNA helicase, RuvA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.451698 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.544618 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGGGC GGCTGTCGGG GGTTCTGGTC TATCGCGGGC GGGATCACAT CGTGTTGGAT
GTGCGCGGCG TGGGCTATGT TGTGCAATGC TCCGAACGCA CGCTGGCGGG GATGCCCGCG
CCCGGCGGGC CCGTGGCGCT CTTTACCGAA CTTCTGGTGC GCGAGGATCT GTTGCAGCTT
TACGGGTTTC CCACGCTGCT TGAGAAAGAG TGGCACCGGC TTTTGACATC TGTGCAGGGG
GTGGGGGCCA AGGCCTCCAT GTCGATCCTG TCGACCCTGG GGGTGGACGG GGTCGGGCGG
GCGATTGCAC TGGGTGATTG GGGCGCGTTG CGCAAGGCCC AAGGTGTGGG TCCGAAGATC
GCGCAGCGGG TGGTCAACGA GTTGAAGGAC AAGGGGCCGG AGGTGATGGC CATGGGCGGG
ACGCTGGAGG CCGCGTTGGA CGGTGTCATC GAGGACGGCA TGGCCGCCTC GGAGGGCATC
GAGCCCCCCT CGGCGGCGCG CCCGGCGGTG CCGTCCGCCG CCAGCGACCA GGCCGGGGCA
CTCTCGGCGC TGGTCAATCT GGGCTATGGG CAGGGCGAGG CGGCCAGTGC CGTAGCCACT
GCGGCGGGCG AGGGGGCCGT GGGCGAGACC GATATCATCC GCGCGGCCCT GCGCCTGTTG
GCGCCGAAAG GATAA
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| Protein sequence | MIGRLSGVLV YRGRDHIVLD VRGVGYVVQC SERTLAGMPA PGGPVALFTE LLVREDLLQL
YGFPTLLEKE WHRLLTSVQG VGAKASMSIL STLGVDGVGR AIALGDWGAL RKAQGVGPKI
AQRVVNELKD KGPEVMAMGG TLEAALDGVI EDGMAASEGI EPPSAARPAV PSAASDQAGA
LSALVNLGYG QGEAASAVAT AAGEGAVGET DIIRAALRLL APKG
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