| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1078 |
|---|
| Symbol | |
|---|
| ID | 5711046 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | + |
|---|
| Start bp | 1106016 |
|---|
| End bp | 1107053 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641266989 |
|---|
| Product | alcohol dehydrogenase zinc-binding domain protein |
|---|
| Protein accession | YP_001532421 |
|---|
| Protein GI | 159043627 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1064] Zn-dependent alcohol dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGCGG CGGTTCTGCG GGCCTATAAC GAGGATCTGG TCCTCGAGGA TGTGCCCGAG
CCGGTCTGCC CCGAAGACGG TGTCGTTCTC AAGGTGCTGG CCTGCGGCGT GTGCCGGTCC
GACTGGCACG GCTGGGTCGG GGAGCATCCG CGGGTCAAGC CCGGCCAGAT CGGCGGGCAC
GAGTATTGCG GCGAGGTGAT CGAGGCCGGG CCGCGGGCGG CCTTCAAGCC GGGCGACCGG
GTGGTGGCGC CTTTCATCCT GGCCTGCGGG TCCTGCCCGT CCTGCCAGGC GGGGGCCCAG
AATACCTGCC CCAACCAGCG CCTGCCGGGC TTTGTCGAGC CGGGTGCCTT TGCCGAATAC
GTGGCGGTGC CCTTCGATCA CAACCTGTCG CGGCTGCCCG ACAGCCTGTC GCCCACGGTG
GCGGCGGGGC TGGGATGCCG GGTGACGACC GCGTGGCATG CCCTGACCGG GCGGGCGGCG
GTGCAGGGCG CGGAATGGGT CGCAGTGCAT GGCACGGGCG GGATCGGCCT GTCCTCGGTG
ATCCTGGCCA ATGCGCTGGG CGCGCGGGTG ATCGCGGTGG ATGTGGTCGA CGAGAAGCTG
ACCCATGCCG CACAGCATGG CGCCGAAGTG ACGCTGAACG CCCGCGAGGG CGACGTGGCC
GCGCGCATCA AGCAGATCAC TGGCGGCGGT GCCCATGTGG CGATCGAGGC GCTGGGCATT
CCCGAGACGG TGAATGCTTC GCTCGAATGT CTGCGGCCCC TGGGACGGCA TGTGCAGGTG
GGCCTGCCCA CGGGCCACAC CGCGCGGATG GAGATCAACA TGTCCGCGAT CTATCAGGGC
AACCTGGCGG TTTACGGCAC GCGGGGGATG CCGTCGTGGC GCTACCCGTC GCTGCTGAGC
CTGATCGAGA CCGGGCGGGT GGACATGTCG CCGCTCATCG CCCGCGAGAT CGGGCTGTCG
GGCACCTCGG CCGAACTGCG CGCCTTCAAC GGTCCGACCC CGCCCGGGGT GGCCGTGATC
ACCGATTTCC AGAGCTGA
|
|---|
| Protein sequence | MRAAVLRAYN EDLVLEDVPE PVCPEDGVVL KVLACGVCRS DWHGWVGEHP RVKPGQIGGH
EYCGEVIEAG PRAAFKPGDR VVAPFILACG SCPSCQAGAQ NTCPNQRLPG FVEPGAFAEY
VAVPFDHNLS RLPDSLSPTV AAGLGCRVTT AWHALTGRAA VQGAEWVAVH GTGGIGLSSV
ILANALGARV IAVDVVDEKL THAAQHGAEV TLNAREGDVA ARIKQITGGG AHVAIEALGI
PETVNASLEC LRPLGRHVQV GLPTGHTARM EINMSAIYQG NLAVYGTRGM PSWRYPSLLS
LIETGRVDMS PLIAREIGLS GTSAELRAFN GPTPPGVAVI TDFQS
|
|---|
| |