Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1062 |
Symbol | |
ID | 5711030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 1096310 |
End bp | 1096927 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641266973 |
Product | isoprenylcysteine carboxyl methyltransferase |
Protein accession | YP_001532405 |
Protein GI | 159043611 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2020] Putative protein-S-isoprenylcysteine methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.600459 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACTG CTGCCGTCCT GCCCGCGAAC CAGAAGCGCC GGATCAACAC GCTCAGGGCG GTGATGCTGG TCATGGTGCC GCTGGTGCTG TTCACCCGGC CCGGCCTGCC CCTGGGCGAG GGTGTGATGG ACCTGGTCGA GAGCACGGGC ATGCTGCTGG TGATCGCCGG GGTTCTGGGG CGGTTCTGGT CGATCCTCTA TATCGGCAGC CGCAAGAACG CGCTGGTCAT GCAGGACGGG CCCTATTCCA TGTGCCGCCA TCCCCTGTAC CTGTTTTCGA CCCTGGCGGT GTTCGGCTTC GGGCTGATGC TGGGCTCGCT GATCCTGACC GTGTTGATGA CCACGCTGGT GTTTCTGGTG CTCAGTGACA TCGCCCGCAA GGAAGAGGCG TTTCTGCGGG CGGAGTTCGG CCCGGCCTAT GACGCCTATG CCGCCCGCAC GCCGCGGATC CTGCCCCGGC TGCGGCAGTT CTCCTCCCCC GCCACGGTCA CGTTCGACAC CGGCACCCTG CGGCGCAATT TCTTCGATGC GCTGGTGTTT CTGAGCCTGA TCCCGGTCAG CGAGTTGACC GAGCATCTCA AGGATATCCA CACCCTGCCG ACCCTGCCGC TGTTCTGA
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Protein sequence | MKTAAVLPAN QKRRINTLRA VMLVMVPLVL FTRPGLPLGE GVMDLVESTG MLLVIAGVLG RFWSILYIGS RKNALVMQDG PYSMCRHPLY LFSTLAVFGF GLMLGSLILT VLMTTLVFLV LSDIARKEEA FLRAEFGPAY DAYAARTPRI LPRLRQFSSP ATVTFDTGTL RRNFFDALVF LSLIPVSELT EHLKDIHTLP TLPLF
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