Gene Dshi_1062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1062 
Symbol 
ID5711030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1096310 
End bp1096927 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content65% 
IMG OID641266973 
Productisoprenylcysteine carboxyl methyltransferase 
Protein accessionYP_001532405 
Protein GI159043611 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2020] Putative protein-S-isoprenylcysteine methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.600459 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACTG CTGCCGTCCT GCCCGCGAAC CAGAAGCGCC GGATCAACAC GCTCAGGGCG 
GTGATGCTGG TCATGGTGCC GCTGGTGCTG TTCACCCGGC CCGGCCTGCC CCTGGGCGAG
GGTGTGATGG ACCTGGTCGA GAGCACGGGC ATGCTGCTGG TGATCGCCGG GGTTCTGGGG
CGGTTCTGGT CGATCCTCTA TATCGGCAGC CGCAAGAACG CGCTGGTCAT GCAGGACGGG
CCCTATTCCA TGTGCCGCCA TCCCCTGTAC CTGTTTTCGA CCCTGGCGGT GTTCGGCTTC
GGGCTGATGC TGGGCTCGCT GATCCTGACC GTGTTGATGA CCACGCTGGT GTTTCTGGTG
CTCAGTGACA TCGCCCGCAA GGAAGAGGCG TTTCTGCGGG CGGAGTTCGG CCCGGCCTAT
GACGCCTATG CCGCCCGCAC GCCGCGGATC CTGCCCCGGC TGCGGCAGTT CTCCTCCCCC
GCCACGGTCA CGTTCGACAC CGGCACCCTG CGGCGCAATT TCTTCGATGC GCTGGTGTTT
CTGAGCCTGA TCCCGGTCAG CGAGTTGACC GAGCATCTCA AGGATATCCA CACCCTGCCG
ACCCTGCCGC TGTTCTGA
 
Protein sequence
MKTAAVLPAN QKRRINTLRA VMLVMVPLVL FTRPGLPLGE GVMDLVESTG MLLVIAGVLG 
RFWSILYIGS RKNALVMQDG PYSMCRHPLY LFSTLAVFGF GLMLGSLILT VLMTTLVFLV
LSDIARKEEA FLRAEFGPAY DAYAARTPRI LPRLRQFSSP ATVTFDTGTL RRNFFDALVF
LSLIPVSELT EHLKDIHTLP TLPLF