| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1056 |
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| Symbol | |
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| ID | 5711024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1089720 |
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| End bp | 1090628 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641266967 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_001532399 |
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| Protein GI | 159043605 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGCCCA ACCCCCGCGT TCCCTATGAA CTTGCGTCCG ACCGCGCGCC TCTGCCGCCC
CTGCGCGGCA AGTCCCTGAT CGTGCATGTG GTGATGAATA TCGAATACTG GCCCTTCGAC
CGGCCCATGC CGCGCGGCAT CATCCCCGCC CCCCACGGGG CCGCGCCCGC GCCGCCGGAT
GTGCCGAATT ACGCCTGGGT CGAATACGGC ATGCGTTGCG GCATGCCGCG CATCATGGGG
CTGCTGGCCG ATCGCGGCAT CCCCGCCTCG GCCTTCATCA ACGCCCAGGT GGCCGACGTA
TATCCCAGCC TCATGGCCGC CACGGTCGAT GCGGGATGGG AGTTGGTCGG CCATGGCTGG
TTCCAGCAGA GCCTCAAGGC CGTGGACGAC GAGCGCGACG TGATCGCCCG CAGCCTCGAC
CGGCTGGCGC AGGTGCAGGG CCACCGCCCG CGCGCATGGC TCGGCTGCGG GCTGGGCGAG
ACCTATGACA CCCCCGACAT CCTGCGCGAA GAGGGGATCG AGTTTCTCCA TGACTGGGCG
CTCGATGACC TGCCGGTCTG GATGCGCACG AAACACGGGC CGATAGTCGG CCTGCCCTAT
ACGTTCGAGC TCAACGACGT GCCGGTCTAC GCGATCCAGA ACGGGTCCAC CGACGAATAT
CTCAAGCGGG TCGAGGCCAC GGTCGAGATC TACGCCGCCG AGACCGCCCG CACCGGCCAG
CCCCGGATCA TGACGCTGGC GCTGCATCCG CATATCATCG GCGTGCCCCA TATCGCGCAT
CATTTCGCCC AGGCGCTCGA CCTTCTGGCG GCCCGCGACG ACACGGTCTT CACCACCTCC
AGCGAGATGG GCGACTGGTT CACCGCCGCC CAAGCCCCCG GCGCCGCCGT CACGGAGAGC
CCCGCATGA
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| Protein sequence | MWPNPRVPYE LASDRAPLPP LRGKSLIVHV VMNIEYWPFD RPMPRGIIPA PHGAAPAPPD
VPNYAWVEYG MRCGMPRIMG LLADRGIPAS AFINAQVADV YPSLMAATVD AGWELVGHGW
FQQSLKAVDD ERDVIARSLD RLAQVQGHRP RAWLGCGLGE TYDTPDILRE EGIEFLHDWA
LDDLPVWMRT KHGPIVGLPY TFELNDVPVY AIQNGSTDEY LKRVEATVEI YAAETARTGQ
PRIMTLALHP HIIGVPHIAH HFAQALDLLA ARDDTVFTTS SEMGDWFTAA QAPGAAVTES
PA
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