Gene Dshi_1050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1050 
Symbol 
ID5711018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1083469 
End bp1083843 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content69% 
IMG OID641266961 
Producthypothetical protein 
Protein accessionYP_001532393 
Protein GI159043599 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0308195 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTTG ACCGCCCGCC CGTGCCCTAT CACGATCTCG ACCTCTCGGA AGGTTGGGAG 
CAGGTCCCCG GCGGTGCCCC GGGGGTGGAG CAGAAGATGC TCTCGGATGT GCTGGACGAG
GAGGCCAAGC GCGGCGTGCG CACCCGGCTG ATCCGGTTCC GGCCGGGCAC CGTGGCACCG
GACGTGTTCC TCCATGACTA TTGGGAGGAG GTCTATTTGA TCGAGGGCAC CCTGATCATG
GGCTGCGACC GAGAGGGCCG CGGCGGCAGC GCCCATGCGG CCCCGGGCTA TGCCTGCCGC
CCGCCGGGCA CGCCGCACGG GCCGTTCGCG TCGCCGCAGG GGTGCCTGTT CTTCGAAATC
CAGTACTACG CCTGA
 
Protein sequence
MSLDRPPVPY HDLDLSEGWE QVPGGAPGVE QKMLSDVLDE EAKRGVRTRL IRFRPGTVAP 
DVFLHDYWEE VYLIEGTLIM GCDREGRGGS AHAAPGYACR PPGTPHGPFA SPQGCLFFEI
QYYA