| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1044 |
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| Symbol | |
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| ID | 5711012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1078350 |
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| End bp | 1079054 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641266955 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001532387 |
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| Protein GI | 159043593 |
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| COG category | [K] Transcription |
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| COG ID | [COG1802] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.000547437 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACCA CCCCCCCGCG CATGAACGCC GCCGAAGCGG CCTACCGGAC GATCCGGGCC
AAGATCGTGT CGGGCGAGTT GGCGGAGGGG GAGCGGCTGA CCGAGAAGCG GCTCTCCAAG
GACCTGGGCC TGTCGCGCAC CCCGATCCGC GAGGCGGTCG GGCGGCTGAT CCTCGAAGGC
TTCGTCGAGC GGCAATCGGG CTATACCACC CGGGTCGCGC GCTTCCCCGA GGACGAGATC
GCCCAGGTCT TCGAGATCCG CGGCGTGCTG GAGGCCTATT CCGCCCGCCG CGCGGCCCGG
CACGCCCGGC CCGATGACAT CGCCGAGATG CGCGAGGTCT ACGCGGTGAT GGCGGCCAAC
TCGCCGCCCC GCTCCGAGGC TGCCTACCAG GTGCTGACCG AGGCGAATGA GCGGTTTCAC
AAGATCATCC TGCGCGCGGC CCAGTCGCCC AAGCTCACCG CGCTGATGAC CATGGCGCTC
GATGTGGGGA TGGTGGTGCG GACCTACCGG ATCTTCACCG AGGCCGACCT GACCCGCAGC
CTGCACCACC ATGGCGAGCT GATCGATGCC ATCGCCGCCC GCGCCCCCGA CTGGGCCGAG
AGCGTCATGC GCGCCCACCT GCTGGCCGGG GCGGCGCGGG TGGCCGAGCA TACGGGCGAT
ATCGGGCAGA AGACGCCGCC GCCGGATGTG AAGGCCGCCG AATGA
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| Protein sequence | MSTTPPRMNA AEAAYRTIRA KIVSGELAEG ERLTEKRLSK DLGLSRTPIR EAVGRLILEG
FVERQSGYTT RVARFPEDEI AQVFEIRGVL EAYSARRAAR HARPDDIAEM REVYAVMAAN
SPPRSEAAYQ VLTEANERFH KIILRAAQSP KLTALMTMAL DVGMVVRTYR IFTEADLTRS
LHHHGELIDA IAARAPDWAE SVMRAHLLAG AARVAEHTGD IGQKTPPPDV KAAE
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