Gene Dshi_1039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1039 
Symbol 
ID5711007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1071506 
End bp1072714 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content69% 
IMG OID641266950 
Productmonooxygenase FAD-binding 
Protein accessionYP_001532382 
Protein GI159043588 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.460547 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCATA TCGTTGTCAT CGGGGCCGGG CCGGTCGGCA CGTCGCTGGC GCTGGCGCTG 
CTGCGTGCCG GGCTGGACGT GACGCTCTGC GAGCAGGCCG AGAGCCTGCC GGCCGATCCG
CGCGCCGCCA CCCTGCAACC GCCGACGCTG GAAATGCTCG ACGCCTTGGG CAGCGGCGCT
GCGATCCGCG CCAAGGGGCT GAAGGCGCCG GTCTTCCAGT TCCGCGACCG GGCCTCCGAC
AGCATCATCG CGGAGTTCGA CTATGGCCTG CTGGAGGGAG AGACCCCCCA CCCCTTCGCC
CTGCAATGCG AGCAGTTCAA GGTGGCCGAC ACCAATGCCG AGGCGATCGA GGCCCTGCGC
CCCGGCACCC TGCGGCTCGG CACCGCCGTC ACCGGCTTTG CCCAGGACGG CGACGGTGTG
GACGTGACCC TGAGCACCGG CGAGACCCTG CGCGCCGACT ACCTCGTGGG CTGCGACGGG
GGGCGGAGTG CGACGCGCAA GGGGCTGGGC ATCGCGTTCG AGGGGTTCAC CTACGAGGAA
CGCTTCCTCG TGCTGACCAC GCCCCATGAC TTCTTCGCCC GCGACTTCCG GGTGCGCAAC
TACGTGCTGG ACCCGAGCCA GTGGTGTGCG CTGTTCAAGG TGCCCCATGA CGGCCCGCCG
GGCCTGTGGC GCATCGTGTT CCCCGCCCCC GCCGCCGACA GTGGCACGGA TGCGCTCTCG
GATGCCTATG TCAGTGCGCA GATGCTCGGG CTGGAGCCTG CGCTGGGGTT GGCCGACATC
ACCCATCGCA ACATCTATGC GGTCAACCAG CGGGTCGCGG CGGCGTTTCG CAAGGGGCGG
GTGTTTCTCG CGGGGGATGC GGCGCATGTT AACAATCCGC TCGGCGGGCT GGGCATGAAC
TCGGGCATCC ATGACGCGGT GAACCTCGCG GACAAGATCG CCCGCGCCGT GGCCGACCCG
GGCAAGGCCG AAACCCTGTT CGGTGCCTAT GACGCCGAGC GGCGGCAGAT CGCCAAGGAG
TACGTGCAGG CCCAGACGAT CCAGAACAAG AAACGCCTGG AGGCCCGGAC CCCCGAACAA
CAGGCCGCCG CCCGCGCGGA GTTGCAGGGC ACCTGCGCCG ATCCCGCCCG GCACAAGGCC
TGGGTGATGA ACGCGTCGCT GCTGACCGGG TTGCGGCAGC TCGAAGACCA AGGAAGGAAA
GCCCCATGA
 
Protein sequence
MTHIVVIGAG PVGTSLALAL LRAGLDVTLC EQAESLPADP RAATLQPPTL EMLDALGSGA 
AIRAKGLKAP VFQFRDRASD SIIAEFDYGL LEGETPHPFA LQCEQFKVAD TNAEAIEALR
PGTLRLGTAV TGFAQDGDGV DVTLSTGETL RADYLVGCDG GRSATRKGLG IAFEGFTYEE
RFLVLTTPHD FFARDFRVRN YVLDPSQWCA LFKVPHDGPP GLWRIVFPAP AADSGTDALS
DAYVSAQMLG LEPALGLADI THRNIYAVNQ RVAAAFRKGR VFLAGDAAHV NNPLGGLGMN
SGIHDAVNLA DKIARAVADP GKAETLFGAY DAERRQIAKE YVQAQTIQNK KRLEARTPEQ
QAAARAELQG TCADPARHKA WVMNASLLTG LRQLEDQGRK AP