Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1023 |
Symbol | cmk |
ID | 5710991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 1058724 |
End bp | 1059362 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641266934 |
Product | cytidylate kinase |
Protein accession | YP_001532366 |
Protein GI | 159043572 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0283] Cytidylate kinase |
TIGRFAM ID | [TIGR00017] cytidylate kinase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.283753 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.516654 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATTTCG CCATTGCGAT CGACGGGCCC GCCGCGGCGG GCAAGGGGAC CATCGGGCGG GCCATGGCGG CGCATTTCGG CTTTCCGCAT ATGGACACCG GGCTGCTTTA CCGTGCGGTG GGGCGGCGGG TGCTGTCGGG CATGCCGGCG TTGGAGGCGG CGCGCGCGCT GACACCCGAG GACCTGCAGG CGGACGGTCT GCGCACGGCG GAGGTGGGGC AGGCGGCCTC CCAAGTCGCG GCCCTGCCGC AGGTGCGCGC GGCGCTGCTG GATTTCCAGC GCGCCTTTGC CCAACGGGCG GGGGGCGCGA TCCTCGATGG CCGCGATATC GGCACGGTGA TCTGCCCGGA TGCGGCGGTG AAGCTTTTCG TGACCGCCTC GGACGATGTG CGCGCGCAGC GCCGCCATGC GGAGCTGATC TCCAAGGGCG CCGATCTGAC CCTCGAGGCG GTTCTGGCCG ACCTGCAGGC GCGCGACGCC CGTGACATGC AGCGCGCCGA TGCGCCCTTG AAACCCGCCG AGGATGCCAT GGTACTCGAT ACTTCGCGGC TTTCCATTGA CGAGGCGGTG GAAAAGGCCA TTGCACTGGC GACTGCGCGC ATGGCGGCCC GGGAATTCTC CCCAATTCGT CCGAATTAA
|
Protein sequence | MNFAIAIDGP AAAGKGTIGR AMAAHFGFPH MDTGLLYRAV GRRVLSGMPA LEAARALTPE DLQADGLRTA EVGQAASQVA ALPQVRAALL DFQRAFAQRA GGAILDGRDI GTVICPDAAV KLFVTASDDV RAQRRHAELI SKGADLTLEA VLADLQARDA RDMQRADAPL KPAEDAMVLD TSRLSIDEAV EKAIALATAR MAAREFSPIR PN
|
| |