Gene Dshi_1023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1023 
Symbolcmk 
ID5710991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1058724 
End bp1059362 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content69% 
IMG OID641266934 
Productcytidylate kinase 
Protein accessionYP_001532366 
Protein GI159043572 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0283] Cytidylate kinase 
TIGRFAM ID[TIGR00017] cytidylate kinase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.283753 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.516654 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTCG CCATTGCGAT CGACGGGCCC GCCGCGGCGG GCAAGGGGAC CATCGGGCGG 
GCCATGGCGG CGCATTTCGG CTTTCCGCAT ATGGACACCG GGCTGCTTTA CCGTGCGGTG
GGGCGGCGGG TGCTGTCGGG CATGCCGGCG TTGGAGGCGG CGCGCGCGCT GACACCCGAG
GACCTGCAGG CGGACGGTCT GCGCACGGCG GAGGTGGGGC AGGCGGCCTC CCAAGTCGCG
GCCCTGCCGC AGGTGCGCGC GGCGCTGCTG GATTTCCAGC GCGCCTTTGC CCAACGGGCG
GGGGGCGCGA TCCTCGATGG CCGCGATATC GGCACGGTGA TCTGCCCGGA TGCGGCGGTG
AAGCTTTTCG TGACCGCCTC GGACGATGTG CGCGCGCAGC GCCGCCATGC GGAGCTGATC
TCCAAGGGCG CCGATCTGAC CCTCGAGGCG GTTCTGGCCG ACCTGCAGGC GCGCGACGCC
CGTGACATGC AGCGCGCCGA TGCGCCCTTG AAACCCGCCG AGGATGCCAT GGTACTCGAT
ACTTCGCGGC TTTCCATTGA CGAGGCGGTG GAAAAGGCCA TTGCACTGGC GACTGCGCGC
ATGGCGGCCC GGGAATTCTC CCCAATTCGT CCGAATTAA
 
Protein sequence
MNFAIAIDGP AAAGKGTIGR AMAAHFGFPH MDTGLLYRAV GRRVLSGMPA LEAARALTPE 
DLQADGLRTA EVGQAASQVA ALPQVRAALL DFQRAFAQRA GGAILDGRDI GTVICPDAAV
KLFVTASDDV RAQRRHAELI SKGADLTLEA VLADLQARDA RDMQRADAPL KPAEDAMVLD
TSRLSIDEAV EKAIALATAR MAAREFSPIR PN