| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1002 |
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| Symbol | metB1 |
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| ID | 5710518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1035541 |
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| End bp | 1036683 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641266913 |
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| Product | cystathionine gamma-synthase |
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| Protein accession | YP_001532345 |
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| Protein GI | 159043551 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.282696 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAATC TTTCCCGCCT GCACCCGGAC ACCCTGGCCG CCCATGGCGG CGGGGCCGTG
GACACCGCTT CGGGCGGCGT CGTGCCGCCG ATCCAGCCGG CCACGACCTT TCGGCGCGGG
CCGGATTACG CGCCCCTGAA CCCCGACAAC ATCTACAGCC GCGATGACAG CGAGGCGCTG
CGCGCGGTCG AGACCCTGCT TGCGGCGTTG GAGGGGGGCG CGGGGGCGCT GGCCTTCCCG
TCGGGCATGG CGGCGACGGC GGCGGTGTTC CGCACCCTGC CCGCCGGGGC GCGCGTGGTG
CTGCAATCGG GCATCTACTG GGGCACGACG AAATGGGTGC GCGATTTCTG CGCCCGGCGC
GGTGTGACCC TGGTGGAGGT GGACGCGGCC GACGCCCACG CGCTGGGGTC GGCCTGCGCC
GCGCCGACGG CGCTGGTCTT TGTCGAGACG CCGTCGAACC CCTGGCTGAA AACGGTCGAT
ATCCGCGCCG CCGCCGCGGC GGCCCATGGG GCGGGCGCGC TGCTGGTGGT GGACAGCACC
GCGGCGACAC CGGTGCTGAC GCGGCCCCTG GGCCTGGGCG CGGACCTGGT GATGCATTCG
GCCACCAAGG GGCTGAACGG GCATTCGGAT GTGCTGGCCG GTGCGCTGGT CACCGCGGAT
GCCGGCCACG AGACCTGGGC GCGGATCGCC ACGGACCGGC ATGACGCGGG CGCGGTGCTG
GGCCCGTTCG AGGCATGGCT GTTGCTGCGG GGGATGCGGA CTCTGCCTCT GCGGGTGGCG
CGGATGAGCG CCACCGCGCT GGAGCTGGCG CAGCGGCTCA GCACCGATAC GCGGGTGGCG
GATGTGTTCT ACCCGGGCCT GCCGGGCCAT GCGGGCCACG ATATCGCGGT GGCGCAGATG
ACGGGCGGGT TCGGCGGGCT GATGTCCTTT CTCGTCCATG GCGACCGGCA GACCGCGCTG
GAGGTGGTCG GGCGGCTGGA GCTGTTCCAG CGGGCCACAT CGCTGGGCGG GGTCGAGAGC
CTGGTGGAGC ACCGCGCCAC CATCGAGCCC GACAGCGGCA TTCCCGAAAC CCTGGTCCGG
CTGTCGGTGG GGATCGAGGA TGCGGGCGAC CTTTGGGCCG ATCTCGACCG GGCGCTTGGC
TGA
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| Protein sequence | MRNLSRLHPD TLAAHGGGAV DTASGGVVPP IQPATTFRRG PDYAPLNPDN IYSRDDSEAL
RAVETLLAAL EGGAGALAFP SGMAATAAVF RTLPAGARVV LQSGIYWGTT KWVRDFCARR
GVTLVEVDAA DAHALGSACA APTALVFVET PSNPWLKTVD IRAAAAAAHG AGALLVVDST
AATPVLTRPL GLGADLVMHS ATKGLNGHSD VLAGALVTAD AGHETWARIA TDRHDAGAVL
GPFEAWLLLR GMRTLPLRVA RMSATALELA QRLSTDTRVA DVFYPGLPGH AGHDIAVAQM
TGGFGGLMSF LVHGDRQTAL EVVGRLELFQ RATSLGGVES LVEHRATIEP DSGIPETLVR
LSVGIEDAGD LWADLDRALG
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