| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0947 |
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| Symbol | pthA |
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| ID | 5710638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 971779 |
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| End bp | 972486 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641266858 |
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| Product | peptidyl-tRNA hydrolase |
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| Protein accession | YP_001532293 |
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| Protein GI | 159043499 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0193] Peptidyl-tRNA hydrolase |
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| TIGRFAM ID | [TIGR00447] peptidyl-tRNA hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCT TCGTGGGGCT GGGCAACCCG GGGCCGAAAT ACGCCCGCAA CCGGCACAAT
ATCGGCTTCA TGGCGCTGGA CCAGATCGCG GCGGATCACG GGTTCTCGCC CTGGCGCACG
AAGTTCTCCG GCCAGATGGC AGAGGGCAAG TTCGGCAGCA CCAAGGTCAC ACTGCTGAAG
CCCGAGACCT TCATGAACCG CTCGGGCCAA TCCGTGGGCG AGGCGATGCG GTTCTTCAAG
CTGGAGCCGG AAGATGTCAT CGTGTTCCAT GACGAGCTGG ACCTGGCCCC CGGCAAGTGC
CGGGTAAAGA CGGGGGGCGG GCATGCGGGC CATAACGGGC TGCGGTCCAT CCACGGCCAT
ATCGGGCCCG AGTATCAACG GGTGCGCCTC GGCATCGGGC ATCCAGGCCA CAAGGATCGG
GTGTCGGGCT ATGTGCTGAG CGATTTCGCC AAGGCGGAGG CGGCGTGGCT CGATGACCTG
CTGCGCGGGA TCGGGGACGG TGCGCCGGAG CTGGCCGCGG GCGACACGGG CCGGTTCATG
AACGCGGTTT CGCTGCGCAC CGCGCCGCCA CGATCCTCGG GCGGGTCGCC GAAGACCGAC
AAACCCGCAA AAGCCACGCG CGAGCCCCCG CCCGCCGCGA AACCGGAGGC CACGCCGGAG
GAAGAGACCC GCTCCCCCCT GCAAAGGCTC GTCGACAAGT TCCGCTGA
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| Protein sequence | MKLFVGLGNP GPKYARNRHN IGFMALDQIA ADHGFSPWRT KFSGQMAEGK FGSTKVTLLK
PETFMNRSGQ SVGEAMRFFK LEPEDVIVFH DELDLAPGKC RVKTGGGHAG HNGLRSIHGH
IGPEYQRVRL GIGHPGHKDR VSGYVLSDFA KAEAAWLDDL LRGIGDGAPE LAAGDTGRFM
NAVSLRTAPP RSSGGSPKTD KPAKATREPP PAAKPEATPE EETRSPLQRL VDKFR
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