| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0918 |
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| Symbol | |
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| ID | 5710608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 942472 |
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| End bp | 943404 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641266828 |
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| Product | auxin efflux carrier |
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| Protein accession | YP_001532264 |
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| Protein GI | 159043470 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0679] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACCATCC TTCTCGAAGT CACGCTGCCC ATCTTCCTTG TGCTTGCGGC GGGCTACGGC
GCGGTCTGGG CCAAGGTGTT CTCCGACGAG AATGTCGAGG CGCTCATGCG CTTCACCCAG
AATTTCGCCA TCCCCTGTCT GCTGTTCTTG GCGATCTCCA CGCTCGATCT CGATGCGGTC
TTCGACTGGC GCCTTCTGAC CAGCTATTAC AGCGGCTCGC TCGCCAGTTT CGCCACCGGC
ATCCTCGGCG CGCGCTTTCT CTTCGCGCGC CCAATGCAGG ATGCGGTCGC CATCGGCTTT
TGCTGCATGT TCGCCAACAC GGTCCTGCTC GGCATCCCGA TCCTCGAACG CGCCCACGGC
CTGCCCGCGC TGGAGCCGCT CTATGCCATC ATCGCGATCC ACGCGCCGTT CGGATATCTC
GTGGGGATCA CCACGATGGA GATCGTGCGC GCCTCGTCGA AAAACGTGTT CGTCACCGTG
GGCGCGATCC TCAAGACCAT GAGCCAGAAC GCCCTGATGA TCGGCATCGC GCTCGGCTTC
GCGGTCAATC TCAGCGGCCT GATGCCCCCC GCCGTGGCCA TCGAGGCGAT CGAGATGATC
GCCCGCGCGG GCATCCCGGC GGCACTTTTC GGGCTGGGCG GGGTGCTCTT TCGCTATAAA
CCCGAAGGCA ACCTGCGCGA GGTGGCCTTC GTCTGCCTGG TCTCACTGAT GCTGCACCCG
CTGGTGGCCT GGGCCATGAG CCGCCTCGTG TTCGGACTGG ACGATCCGAT GATCCGCGCC
GCCGCCCTGA CCGCGGCCAT GGCCCCGGGG GTGAACACCT ATATCTTCGC CAACATGTAC
GGGGTGGCGA AACGGGTGGT TGCGACCGCC GTTCTGGCCG GCACGGCGCT CTCGATCCTG
CTCGCCGCCT TCTGGCTCAG CGTCCTGCCC TGA
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| Protein sequence | MTILLEVTLP IFLVLAAGYG AVWAKVFSDE NVEALMRFTQ NFAIPCLLFL AISTLDLDAV
FDWRLLTSYY SGSLASFATG ILGARFLFAR PMQDAVAIGF CCMFANTVLL GIPILERAHG
LPALEPLYAI IAIHAPFGYL VGITTMEIVR ASSKNVFVTV GAILKTMSQN ALMIGIALGF
AVNLSGLMPP AVAIEAIEMI ARAGIPAALF GLGGVLFRYK PEGNLREVAF VCLVSLMLHP
LVAWAMSRLV FGLDDPMIRA AALTAAMAPG VNTYIFANMY GVAKRVVATA VLAGTALSIL
LAAFWLSVLP
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