Gene Dshi_0913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0913 
Symbol 
ID5710603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp935635 
End bp935829 
Gene Length195 bp 
Protein Length64 aa 
Translation table11 
GC content69% 
IMG OID641266823 
Productthiamine biosynthesis protein ThiS 
Protein accessionYP_001532259 
Protein GI159043465 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2104] Sulfur transfer protein involved in thiamine biosynthesis 
TIGRFAM ID[TIGR01683] thiamine biosynthesis protein ThiS 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.133934 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCTCA TCATTAACGG CGAGACCCGC ACGACCGAGG CCGCGACCCT CGCGGACCTG 
CTGACCGAGC TCGGCCATTC CGGCAGCGTC GCGACGGCCG TGAACGAAAT CTTCGTGCCC
GCCGCGACCC GCGCCACGCA AACCCTCTCC CCCGGCGACC GGATCGAGAT CCTCGCCCCG
ATGCAAGGCG GCTGA
 
Protein sequence
MQLIINGETR TTEAATLADL LTELGHSGSV ATAVNEIFVP AATRATQTLS PGDRIEILAP 
MQGG