| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0892 |
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| Symbol | |
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| ID | 5710582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 908084 |
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| End bp | 909016 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641266802 |
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| Product | transposase IS4 family protein |
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| Protein accession | YP_001532238 |
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| Protein GI | 159043444 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.444367 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.700917 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAAGC CCGCTCCTCC CCGCTATCGA ACAACGAACT GGTCTGAGTA CAACAAGGCG
CTTCGGAGGA GGGGTTCGCT GCTGGTCTGG TTCGACCGCG ACATGACGTG GCTGTCTGAA
CGGACCGGCA AGCGGGGACG ACCGGACGTA TTCTCCGATG CAGCGATCCA GTTCTGCCTG
AGTGTGAAGG TGTTGTTTGG CCTGCCGCTT CGCCAAACCT CCGGTATGGT CGCGAGCCTT
TTGGAAATGG CTGACCTCGA CTGGCCGGTG CCGGACTTCA GCACGTTGTG CCGGCGCCAA
AGAACCTTGA ACGTCCAGAT CCCCTATCGC CGCGTGGATG GACCGCTGAA CCTGCTTGTG
GATAGCACAG GGATCAAGTT CTTGGGCGAC GGAGAGTGGC AGGTTCGCAA GCATGGCACC
AGCCGCCGAC GTCAATGGCG CAAGGTTCAT CTGGCCATGG ACACCACTAC ATCCGACATC
CGAGCGGTGG AGTTCACGTC CAGTCGGGAC GGCGACAGCC CCGTCTTGCC TGACCTTCTG
GAACAGATCC CCGAGGACGA ACAGATCGGC ACCGTGACAG CCGATGGTGC CTACGATACC
CGCAGATGTC ACGCCGCCAT CATTGCCAGA GATGCCGAAG CAATCATCCC GGTTCGCCGG
AACGGACGAT TGTGGAAGGA GGACGGTCCT GCCGCCAGGG TCCGCAACGA GATACTACGG
GCCTCACAAC GCTTCGGCAG ATCTCTCTGG AAGCGATGGA GCGGCTACCA CGCCCGAAGC
CGTGTCGAGG CCAAGATGCG ATGCCTCAAA TCATTCGGTG AACGCATTAT GGCAAGAGAC
CCCGACCGAC AAACCGCAGA AATCCACATC CGCATCGCCC TCATGAACCG TTTCTCAGCC
CTCGGAAAGG CTGACGTCGT TTGTGAAGCG TGA
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| Protein sequence | MPKPAPPRYR TTNWSEYNKA LRRRGSLLVW FDRDMTWLSE RTGKRGRPDV FSDAAIQFCL
SVKVLFGLPL RQTSGMVASL LEMADLDWPV PDFSTLCRRQ RTLNVQIPYR RVDGPLNLLV
DSTGIKFLGD GEWQVRKHGT SRRRQWRKVH LAMDTTTSDI RAVEFTSSRD GDSPVLPDLL
EQIPEDEQIG TVTADGAYDT RRCHAAIIAR DAEAIIPVRR NGRLWKEDGP AARVRNEILR
ASQRFGRSLW KRWSGYHARS RVEAKMRCLK SFGERIMARD PDRQTAEIHI RIALMNRFSA
LGKADVVCEA
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