| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0880 |
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| Symbol | |
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| ID | 5710570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 895664 |
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| End bp | 896512 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641266790 |
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| Product | hydratase/decarboxylase |
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| Protein accession | YP_001532226 |
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| Protein GI | 159043432 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3971] 2-keto-4-pentenoate hydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.777831 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGCG GATGGATATG GGCGGCGGTG GCGGGGCTGA TGCTGCCGGG GGTGGCGCAG
GCGGGGTGCG CCACGGACGC GGAGGTTGCG GCCTTCGTGG AGGATTACCT GGCCAAGACG
CCCACCAAAG CGCTGAGCCC GGAGGCGACG CTGGAGGAGG CGCGCTGCAC GCAGGCCAAG
GTGGTCGCGG CCCTCGAGCC GCATCTGGGC CCGGTGGTGG GCTACAAGGC GGGGCTGACC
AGCGACGCGG CGATGGCGGC CTTCGGGGTG AGCGAGCCGG TAGCCGGGGT GCTGTACCGC
GACATGTTCC TGGAGGATGG CGCGACGGTG GCCCAGCCCC ATGGCGCGCG GCCGCTCTTC
GAGGCGGACC TGGTGTTCGT GGTGGGCAGT GCCGCGATCA ACGACGCCGA GACCGGCGCG
GACGTGATGG ATGCCATCGC CTCGATCCAC GCCTTCATCG AGCTGCCAGA CCTGATGTAC
GGCCCCGACG AGCCGCTCAA CGGCGCGTCG ATCACCGCGG GGGGTGTGGG CGCGCGGGCG
GGTGTGCTAG GCCCGGCGAT CCCGTTCGAA GACAGCGGCG CGATGATAGA CCTTTTGGCC
GAAATGCAGG TGCGGGTCAC CGATGCGGAG GGCACGGTGC TGTCCGAGGC GCCCGGGGCG
GCGGTGCTCG GCAACCCGCT GCGATCCGTG GTCTGGCTGC GCAGCACGGG CATCACCTTC
AAGCCAGGCG ACATGATCTC GGTCGGCTCC ATCGGCCCGC TGATGCCGCC GGCAAAGGCC
AAGGGACGCG CGACGGTGGA ATACCTCGGG CTGCCCGGGA CACCGACGCT GACGGTGAAT
TTCGAGTAA
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| Protein sequence | MMRGWIWAAV AGLMLPGVAQ AGCATDAEVA AFVEDYLAKT PTKALSPEAT LEEARCTQAK
VVAALEPHLG PVVGYKAGLT SDAAMAAFGV SEPVAGVLYR DMFLEDGATV AQPHGARPLF
EADLVFVVGS AAINDAETGA DVMDAIASIH AFIELPDLMY GPDEPLNGAS ITAGGVGARA
GVLGPAIPFE DSGAMIDLLA EMQVRVTDAE GTVLSEAPGA AVLGNPLRSV VWLRSTGITF
KPGDMISVGS IGPLMPPAKA KGRATVEYLG LPGTPTLTVN FE
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