| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0829 |
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| Symbol | deoB |
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| ID | 5711455 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 837056 |
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| End bp | 838255 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641266738 |
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| Product | phosphopentomutase |
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| Protein accession | YP_001532175 |
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| Protein GI | 159043381 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1015] Phosphopentomutase |
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| TIGRFAM ID | [TIGR01696] phosphopentomutase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.654335 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGTG CCTTCCTGAT CGTGATGGAC AGCGTCGGCT GCGGCGGTGC CCCCGATGCC
GCGGATTTCG GCGACGAAGG CGCCAACACG CTGGCCCATA TCGCCCAGGC CTGTGCCGCC
GGTCGGGCCG ACGCGGGGCG CAGCGGCCCC CTGCGCATGC CGGTGCTCGA CGGGCTGGGG
CTGGGCGCGG CGATCCGGCT GGCCTCCGGC GCCGAGACGC CGGGGCTGGC GGCGACGCCG
ACTGGGCTCT GGGGGGCGGC GACCGAGGTG TCGCGCGGCA AGGACACCCC CACCGGGCAC
TGGGAGCTTG CGGGCGTTCC AGTCCCCTGG GAATGGACGA CCTTCCCCGA CACCGACCCG
GCCTTCCCGC CCGACCTGCT GGCCGAGATG GCGCGGGCCG CGGGCACCGA GGGCACGCTG
TGCAACACCC ATGCCTCGGG CACCGAGGTG ATCGAGCGTT TCGGGGCGGA ACATCTGCGC
ACCGGCTGGC CGATCTGCTA CACCTCCGTG GACAGTGTGC TGCAGATCGC CGCCCATGAA
GAGGCCTTCG GGCTCGACCG TTTGCTGGAC GTGTGCGAAA CCCTCGCGCC GCGCCTGCAC
GCGATGAAGG TCGGCCGCGT GATCGCGCGG CCCTTCCTCG GCTCGGAGGC GACAGGCTTC
GCCCGCACCC AGAACCGCCG CGACTTCGCC ATCGCGCCCC CGGCGCCGAC CCTGTGCGAC
CGGGTTCAGG CCGCCGGGCG CCGGGTCCAT GCCATCGGCA AGATCAAGGA TATCTTCTCC
GGGCGCGGCA TCGACACGGT CGCCAAGGGG TCCGATGCCG CGCTGATGGA GGCGCTGATC
GCCGCCGGGC AGGTGGCCGA GGAGGGCTCC CTCACCTTCG CGAATTTCGT CGAATTCGAC
AGCCTCTATG GTCACCGCCG CGACGTAGCG GGCTATGCCC GCGCTCTGGA ATGGTTCGAC
GCGCAACTGC CCCGTTTCCT CGCGACCCTG CGGCCCGGAG ACCTCGCGAT CTTTACCGCC
GATCACGGCA ACGACCCCAC CTGGCACGGC ACCGAACACA CACGCGAACG CGTCCCGGTG
GTCGGCTACG GCGTGGGCGT CCATGAAGTC GGAATTGTCG GATTTAGGGA TGTCGGGGCG
ACGATTGGCG CCCATCTAGG GGTCGAAATG TTCGATATGG GCAAAGCGAT GCTGCCATGA
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| Protein sequence | MTRAFLIVMD SVGCGGAPDA ADFGDEGANT LAHIAQACAA GRADAGRSGP LRMPVLDGLG
LGAAIRLASG AETPGLAATP TGLWGAATEV SRGKDTPTGH WELAGVPVPW EWTTFPDTDP
AFPPDLLAEM ARAAGTEGTL CNTHASGTEV IERFGAEHLR TGWPICYTSV DSVLQIAAHE
EAFGLDRLLD VCETLAPRLH AMKVGRVIAR PFLGSEATGF ARTQNRRDFA IAPPAPTLCD
RVQAAGRRVH AIGKIKDIFS GRGIDTVAKG SDAALMEALI AAGQVAEEGS LTFANFVEFD
SLYGHRRDVA GYARALEWFD AQLPRFLATL RPGDLAIFTA DHGNDPTWHG TEHTRERVPV
VGYGVGVHEV GIVGFRDVGA TIGAHLGVEM FDMGKAMLP
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