| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0822 |
|---|
| Symbol | ppnK |
|---|
| ID | 5711448 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | + |
|---|
| Start bp | 827012 |
|---|
| End bp | 827779 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641266731 |
|---|
| Product | inorganic polyphosphate/ATP-NAD kinase |
|---|
| Protein accession | YP_001532168 |
|---|
| Protein GI | 159043374 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0061] Predicted sugar kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAATCC GCGAAAAGAT TGCGTTTCTT GCCAGCCCCG CGGATGTTGC ACAGCAAGCC
CGCGCGGCGC TCTCGGCGGT GCATGGCCAT GTCCCCCCCG AGGAGGCCGA CGTGATCGTG
GCGCTGGGCG GCGACGGGTT CATGCTCCAG ACCCTGCACG CGACGGAGTC GCTGCGCGCG
CCGGTCTACG GGATGAACTG CGGCAGCGTC GGGTTCATGA TGAACGAGTA TTCCGAGGCC
GCCTTGCCCG AACGGCTGGC CGCGGCGGAG GAAGAGGTCA TCAACCCGCT GCATATGAAG
GCCATCGGGC GTGACGGCAC CGTGGTCGAG GCGTTGGCGA TCAACGAGGT GGCGCTGCTG
CGCGCAGGGT CCCAGGCGGC CAAGCTGCGG ATCTCGGTAG ACGGGCGGGT GCGGATGGAC
GAGCTGGTCT GCGACGGGGC GCTGGTGGCC ACGCCCGCGG GCTCGACCGC CTACAACTAC
TCCGCCCACG GGCCGATCCT GCCCATCGGG TCCGACGTGC TGGCGCTGAC GGCGATGTCG
GCGTTCCGGC CCCGGCGCTG GCGCGGCGCG CTTCTGCCCA AGACGGCGAT GGTGCGGTTC
GATGTGCTGG AGCCGTCCAA GCGCCCGGTG ATGGCTGATG CGGACAGCCG GTCGAACCAC
GAGGTCGTGT CGGTCGAGAT CCGCTCCGAG CCCAGCGTCC GCCACCGTAT CCTGTTCGAC
CCGGGCCACG GGTTGGAGGA GCGGCTGATC CGCGAGCAGT TCGTCTGA
|
|---|
| Protein sequence | MQIREKIAFL ASPADVAQQA RAALSAVHGH VPPEEADVIV ALGGDGFMLQ TLHATESLRA
PVYGMNCGSV GFMMNEYSEA ALPERLAAAE EEVINPLHMK AIGRDGTVVE ALAINEVALL
RAGSQAAKLR ISVDGRVRMD ELVCDGALVA TPAGSTAYNY SAHGPILPIG SDVLALTAMS
AFRPRRWRGA LLPKTAMVRF DVLEPSKRPV MADADSRSNH EVVSVEIRSE PSVRHRILFD
PGHGLEERLI REQFV
|
|---|
| |