Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0784 |
Symbol | |
ID | 5711220 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 790711 |
End bp | 790959 |
Gene Length | 249 bp |
Protein Length | 82 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641266693 |
Product | RNA-binding S4 |
Protein accession | YP_001532130 |
Protein GI | 159043336 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1188] Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.000665287 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.0698441 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACGAAGC CCGCGGCCTC GGTCGGGGCG GGGGATGTGC TGACCTTCGC GCAGGGGCGG CAGATTCGCG TGATCCGCGT CGAAGCGGCG GGCATGCGGC GCGGCCCGGC CCCCGAGGCA CAGGCGCTCT ACACCGATCT GACCCCGGTG CCGGACCCCT GCGAGCCGCC CCCGGTGCGC AAGGGGCCGA GGCCGACCAA GAAACATCGT CGCGACTACG AGGAATCCCG GCGCCCCCCG CTTGAATGA
|
Protein sequence | MTKPAASVGA GDVLTFAQGR QIRVIRVEAA GMRRGPAPEA QALYTDLTPV PDPCEPPPVR KGPRPTKKHR RDYEESRRPP LE
|
| |