Gene Dshi_0784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0784 
Symbol 
ID5711220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp790711 
End bp790959 
Gene Length249 bp 
Protein Length82 aa 
Translation table11 
GC content73% 
IMG OID641266693 
ProductRNA-binding S4 
Protein accessionYP_001532130 
Protein GI159043336 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1188] Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.000665287 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0698441 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGAAGC CCGCGGCCTC GGTCGGGGCG GGGGATGTGC TGACCTTCGC GCAGGGGCGG 
CAGATTCGCG TGATCCGCGT CGAAGCGGCG GGCATGCGGC GCGGCCCGGC CCCCGAGGCA
CAGGCGCTCT ACACCGATCT GACCCCGGTG CCGGACCCCT GCGAGCCGCC CCCGGTGCGC
AAGGGGCCGA GGCCGACCAA GAAACATCGT CGCGACTACG AGGAATCCCG GCGCCCCCCG
CTTGAATGA
 
Protein sequence
MTKPAASVGA GDVLTFAQGR QIRVIRVEAA GMRRGPAPEA QALYTDLTPV PDPCEPPPVR 
KGPRPTKKHR RDYEESRRPP LE