| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0781 |
|---|
| Symbol | |
|---|
| ID | 5711217 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | - |
|---|
| Start bp | 786642 |
|---|
| End bp | 786929 |
|---|
| Gene Length | 288 bp |
|---|
| Protein Length | 95 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641266690 |
|---|
| Product | sterol-binding domain protein |
|---|
| Protein accession | YP_001532127 |
|---|
| Protein GI | 159043333 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3255] Putative sterol carrier protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0276166 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.045948 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAG TGATCGAGAA GGCCGTCGAG GCCCTGCAGC AACGTCTACC TGACGGGTTC
GATGGCACGG TGAAATTCGT CATCGAAGAC GAAGGCGCCG TGATGGTGGA CGAAAACGGC
GTGCGCGCCG GCGACGAGGA CGCCGAATGC ATCCTGACCG CCAGTTCGGA CACTTTCCAG
GGGATCATGT CCGGCGACGT CAATCCCACG GCGGCTTTCA TGACCGGCAA GCTGAAGCTG
GACGGTGACA TGGGGATGGC GATGAAACTC GGCAGCGCGC TGAGCTGA
|
|---|
| Protein sequence | MSEVIEKAVE ALQQRLPDGF DGTVKFVIED EGAVMVDENG VRAGDEDAEC ILTASSDTFQ
GIMSGDVNPT AAFMTGKLKL DGDMGMAMKL GSALS
|
|---|
| |