| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0748 |
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| Symbol | lolD |
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| ID | 5711183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 756395 |
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| End bp | 757078 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641266656 |
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| Product | ABC transporter related |
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| Protein accession | YP_001532094 |
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| Protein GI | 159043300 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAGC CGGTGCTGGT CCTCGACGGG ATCACCAAGA CCTACAACGC AGGCACGCCG
GGGGAGATCG CAGTGCTGCG CGGCGCGTCC CTGAGCGTGG CGCCGGGGGA GGTCGTGGCG
CTCGTTGCGC CCTCGGGGTC GGGCAAGTCG ACGCTCTTGC ATATCGCGGG GCTGCTGGAT
GTGCCGGATG CGGGGACGGT GACGCTGGCG GGTACGGCGG TCGCGGGTTT GCCGGACCGG
ACGCGCACCG CGCTGCGCCG TCGCGAGGTG GGATTTATCT ATCAATTTCA TCATCTTCTG
CCGGAATTCG ATGCCGCCGA GAACGTGATC CTGCCGCAGC TTGCAGACGG GGTGCCGGAG
GCCGACGCAC GGGCACGGGC CGAGGGATTG CTGGCCTCCG TGGGCCTTGG CGCGCGGCTG
ACGCACCGTC CCGCGGCGCT GTCGGGGGGG GAGCAGCAGC GGGTCGCGTT CTGCCGCGCG
CTGGCCAATG CACCCAAGGT TCTGCTGGCC GACGAGCCGA CGGGGAACCT CGATCCCGCG
ACCTCGGACA CGGTGTTCGA CGCGATGATG GCGCAGGTGC GGGAGACCGG GCTGAGTGCG
GTGATCGCGA CCCACAACAT GGCGCTGGCG GGCCGGATGG ACCGGGTGGT GCGGATGGAA
AACGGGGTCC TGTCGGAGGG CTAG
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| Protein sequence | MSEPVLVLDG ITKTYNAGTP GEIAVLRGAS LSVAPGEVVA LVAPSGSGKS TLLHIAGLLD
VPDAGTVTLA GTAVAGLPDR TRTALRRREV GFIYQFHHLL PEFDAAENVI LPQLADGVPE
ADARARAEGL LASVGLGARL THRPAALSGG EQQRVAFCRA LANAPKVLLA DEPTGNLDPA
TSDTVFDAMM AQVRETGLSA VIATHNMALA GRMDRVVRME NGVLSEG
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