| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0720 |
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| Symbol | |
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| ID | 5711155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 728279 |
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| End bp | 728668 |
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| Gene Length | 390 bp |
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| Protein Length | 129 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641266628 |
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| Product | endoribonuclease L-PSP |
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| Protein accession | YP_001532066 |
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| Protein GI | 159043272 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
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| TIGRFAM ID | [TIGR00004] endoribonuclease L-PSP, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.0884731 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTGAAT TTCATTTCAT CGATGCGGCC CCGACCCCGG TCGGCCCGTT CTGCCATGCG
ACCGAGACCG ATGGCTGGGT GTTCCTGACC GGCCAGATGC CCACGGACCC CGGTGACGCG
GACGCGCCCC TGCCCGAGGG GATCGAGGCG CAGGCGCGTC GGGTGATGGA CAACCTCGTG
CTTGTGCTGG AGGGGGCGGA GCTGGGCCTG GGCGACGTGG TGCAGTGCCG GTGTTACCTG
ACAGAGTTCG AACGGGATTT CGACGCGTTC AACCAGGTCT ACATGTCCTA TTTCCCCGAA
GGCGCGCGCC CGGCGCGCAC CACGATCGGG GTGACTGCGC TGGCGGTCGG TGCGCTGGTC
GAGGTCGACA TGGTGGCGCG GCGCCCATGA
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| Protein sequence | MPEFHFIDAA PTPVGPFCHA TETDGWVFLT GQMPTDPGDA DAPLPEGIEA QARRVMDNLV
LVLEGAELGL GDVVQCRCYL TEFERDFDAF NQVYMSYFPE GARPARTTIG VTALAVGALV
EVDMVARRP
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