| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0621 |
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| Symbol | |
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| ID | 5712075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 613772 |
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| End bp | 614260 |
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| Gene Length | 489 bp |
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| Protein Length | 162 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641266524 |
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| Product | fasciclin domain protein |
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| Protein accession | YP_001531968 |
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| Protein GI | 159043174 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2335] Secreted and surface protein containing fasciclin-like repeats |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGTC GCTTCGCACT CAAAACCGCC GCCGCCTTCG GGCTGGTCGG CCTCGTCGCT
GCCTGTGATC CCATGGCCGG TGGCAATGAC ATCGTCGACA TCGCGTCCTC GAACGCCGAT
TTCTCGACCC TCGTGGCCGC CGTGAGTGCC GCGGGCCTCG TCGACACGCT CAAGGGCGAC
GGACCTTTCA CGGTCTTCGC CCCCACGAAC GACGCATTCG CTGCGCTGCC CGCGGGCACC
GTCGAGAGCC TGCTCGAGCC CGAGAACCGT GACCAGCTGG TCGCCATCCT GACCTACCAC
GTCATTCCCG GCGCGGTGAC CTCGGATCAG CTCGCAGGGG CCACGCTCGA CGTCGCGACC
GTGCAGGGCG GCACCGTCAA GGTGGACGGC ACCGATGGCG TCATGGTCAA CGATGCCACC
GTGACCACGG CGGACATCAC CGCCTCCAAC GGCGTGATCC ACGTGATCGA CAAGGTTCTG
CTGCCCTGA
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| Protein sequence | MNRRFALKTA AAFGLVGLVA ACDPMAGGND IVDIASSNAD FSTLVAAVSA AGLVDTLKGD
GPFTVFAPTN DAFAALPAGT VESLLEPENR DQLVAILTYH VIPGAVTSDQ LAGATLDVAT
VQGGTVKVDG TDGVMVNDAT VTTADITASN GVIHVIDKVL LP
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