| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0601 |
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| Symbol | nadE |
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| ID | 5712055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 593670 |
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| End bp | 595343 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641266504 |
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| Product | NAD synthetase |
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| Protein accession | YP_001531948 |
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| Protein GI | 159043154 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0171] NAD synthase
[COG0388] Predicted amidohydrolase |
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| TIGRFAM ID | [TIGR00552] NAD+ synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGACA CGTTCCGCCT GACCCTTGGG CAGTTGAACC CGACCCTTGG GGCGCTGAGC
GAGAACGCTC AGAAGGCCCT GCGAGCCTGG CAGGAGGGCA AGTTGGCCGG CGCGCAGTTC
GTGGCGCTGC CGGAGATGTT CCTGACCGGC TACCAGACAC AGGACCTCGT CATGCGCCCG
GCCTTCGCCG CGGACGCCGA ACGGGTGTTG CAGGGGCTGG CCCGGGATTG CGCGGACGGG
CCTGCGCTGG GCATCGGGTG CCCGCTGGTT CAAGGCGGCA AGCTCTACAA CAGCTACGCC
ATCCTCGAGG GCGGCGCGGT CAAGGCGCGG GTGCTTAAGC ATCACCTGCC CAATAGCGAC
GTGTTCGACG AAGAACGCCT GTTCACCGCT GGACCCGTCA GCGGGCCGTA CCGGATCGGC
CCTCTGCGCA TCGGAACGCC GATTTGCGAG GACGCGTGGT ATCCGGACGT GGCCGAAACC
CTGGCCGAAT CCGCAGCCGA GATCCTGTTC GTGCCCAACG GCTCCCCCTA TCACCGGGGC
AAGCACGACA CGCGCCTGAA CCTGATGGTG GCGCGCGTGA TCGAGACCGG TCTGCCGCTG
ATCTACCTCA ACATGGTCGG CGGGCAGGAC GACCAGATGT TCGATGGCGC CAGCTTTGCC
CTGAACACCC ACGGGGCGTT GGCGATGCAA CTGCCCGCGA TGGAAGAGGT GATCGCCCAT
CTCGACCTGA CCCAAACGGC GGAGGGCTGG CGGATCGAGG ACGCGCGCAA GGACCCGCTC
CCCGACGAGT GGGAGGCGGA CTACCGTGTC ATGGTGGAAT CCCTGCGCGA TTACCTGCGC
AAATCGGGGT TCGGCAAGGT GCTCCTGGGG CTCTCCGGCG GAATCGACAG TGCGATCGTC
GCGGCGATCG CGGCGGATGC GATCGGTCCG CAAAACGTGC GCTGTGTCAT GCTGCCGTCG
GAATACACCT CGCAGGAGTC GCTGGAAGAT GCCGAGGCCG TAGCCCGCAA CCTCGGCTGC
CGGATCGACA CCCTGCCGAT CACTGGTCCG CGGGCGGCCG TGACCGAAGT GCTGGCCCCG
TTTTTCAATG GAACACCGTC GGGGATTGCC GAGGAAAATG TGCAATCGCG GTTGCGCGGC
GTGCTTTTGA TGGCGCTGAG CAACAAGTTC GGCGAGATGC TGCTGACCAC GGGCAACAAG
TCCGAGGTCG CCGTGGGGTA TGCCACGATT TATGGTGATA TGGCAGGGGG TTACAACCCG
ATCAAGGATC TCTACAAGAC CCGGGTGTTC GAGACGTGCC GCTGGCGCAA CGAGACCCAC
CGCCCCTGGA TGTTGGGGCC GGAGGGGGAG CTGATACCAG ATCGTGTGAT CGAAAAGCCC
CCCTCGGCGG AGTTGCGCGC GGACCAGAAG GACGAGGACA GCCTGCCGCC CTACGGCGTG
CTGGACGCGA TCCTCGAAGG GCTGATCGAC CGGGAGGCAT CGGTGGCCGA ACTGGTCGCC
GACGGGTTCG ACCTGGACAC CGTCAAGAAG ATCGAGCATC TGATTTTCAT CAGCGAATAC
AAGAGGTTCC AGTCTGCCCC CGGGGCGCGT CTGACCAAGC GGGCGTTCTG GCTCGACCGG
CGCTATCCCA TCGTGAACCG CTGGCGCGAC ACCTCGGCGA CCCGCAACCA CTGA
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| Protein sequence | MSDTFRLTLG QLNPTLGALS ENAQKALRAW QEGKLAGAQF VALPEMFLTG YQTQDLVMRP
AFAADAERVL QGLARDCADG PALGIGCPLV QGGKLYNSYA ILEGGAVKAR VLKHHLPNSD
VFDEERLFTA GPVSGPYRIG PLRIGTPICE DAWYPDVAET LAESAAEILF VPNGSPYHRG
KHDTRLNLMV ARVIETGLPL IYLNMVGGQD DQMFDGASFA LNTHGALAMQ LPAMEEVIAH
LDLTQTAEGW RIEDARKDPL PDEWEADYRV MVESLRDYLR KSGFGKVLLG LSGGIDSAIV
AAIAADAIGP QNVRCVMLPS EYTSQESLED AEAVARNLGC RIDTLPITGP RAAVTEVLAP
FFNGTPSGIA EENVQSRLRG VLLMALSNKF GEMLLTTGNK SEVAVGYATI YGDMAGGYNP
IKDLYKTRVF ETCRWRNETH RPWMLGPEGE LIPDRVIEKP PSAELRADQK DEDSLPPYGV
LDAILEGLID REASVAELVA DGFDLDTVKK IEHLIFISEY KRFQSAPGAR LTKRAFWLDR
RYPIVNRWRD TSATRNH
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