| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0598 |
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| Symbol | |
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| ID | 5712052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 589775 |
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| End bp | 590440 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641266501 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001531945 |
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| Protein GI | 159043151 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCCTC GCGCCCTCGT GCTCGGCAGT TCCGGCGGCA TTGGTGCCGC GCTGGTTGCG
GAGCTAACAA AAACACACGA AATCAAGGGC CTGTCGCGGA GCGTCGACGG GTTCGACATC
ACGGACGAGG ACTCGGTCAA CGCCCATCTG AGCCGTCTGG AGGGTCCTTT CGCGCGGGTC
GTGGTCGCCA CCGGCGCGCT CGAGATCGGC GGGGCGGCAC CGGAAAAGTC CCTGCGCGAC
CTCTCGCCGC AGGGTCTCCT GGATCAGTTC GCCCTGAATG CGATGGGGCC GGCACTGGTG
CTTCGGCACG CGCAGCGGCT GTTGCCCAAG GATACCCCCT GCGTCTTCGC CGTGCTGTCG
GCGCGGGTCG GTTCGATCGG CGACAACCGG CTCGGCGGTT GGTACAGTTA CCGGGCCGCC
AAGGCTGCGG TGAACCAGAT CGTCCATACG GCGGCGATCG AGATTTCCCG CACCCACAAG
CAGGCGGCCG TCATTGCTCT GCATCCCGGC ACGGTCGCCA CGCCGTTCAC CGCGAAATAC
CTCGGACGAC ACCCCGCCGT GGCACCCGCG GAGGCCGCGG CCAACCTCGT GCGGGTCATG
GACGGCGTCA CCGCCGCGCA GACCGGCGGA TTTTTCGACT GGGCCGGCAA GGAGGTGCCC
TGGTGA
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| Protein sequence | MAPRALVLGS SGGIGAALVA ELTKTHEIKG LSRSVDGFDI TDEDSVNAHL SRLEGPFARV
VVATGALEIG GAAPEKSLRD LSPQGLLDQF ALNAMGPALV LRHAQRLLPK DTPCVFAVLS
ARVGSIGDNR LGGWYSYRAA KAAVNQIVHT AAIEISRTHK QAAVIALHPG TVATPFTAKY
LGRHPAVAPA EAAANLVRVM DGVTAAQTGG FFDWAGKEVP W
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