Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0594 |
Symbol | mreC |
ID | 5712048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 584869 |
End bp | 585768 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641266497 |
Product | rod shape-determining protein MreC |
Protein accession | YP_001531941 |
Protein GI | 159043147 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1792] Cell shape-determining protein |
TIGRFAM ID | [TIGR00219] rod shape-determining protein MreC |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGGCAAGGC ATCGCAACGA AGACGACATC TATTTCAAGC CGATCCGCCG GGTGCTGATC GGGTGTCTCG TCGTGGTATT GCTCGGCCTG TTCGCATTCT GGCGGATCGA CAGCCCACGC GTCGAGCAAA TGCGGATGAG CGTGATAGAG CGCGTGGTGC CCAACCTCGA CTGGGTGATG GCGCCGATCA CCGCTGTGTC GCGCATGGCA GAAGACTTCC AGTCCTACGC GCGTCTGTTC GAGCAGAACG AAGAGTTGCG CCGCGAATTG CAGCAGATGA AGGCCTGGCG CGAAGCCGCC CTGCAACTGG AGCAGGAGAA CGCGCAGCTT CTCGGGCTGA ACAATGTCCG GATCGAGCCG GAGCTGACCT TCATCACCGG CGTTGTGACG GCCGATAGCG GCTCGCCGTT CCGGCGTTCC GTGCTGCTTA ACGTCGGCTC CGAAGACGGG GTGCAAGATG GATGGGCCAC GATGGACGGT CTCGGCCTCG TCGGCCGCAT CGCGGGAACG GCGCCGTCGG TGGCCAGGGT GCTGTTGCTG ACAGACCCGT CGAGCCGGGT GCCCGTGATC CTGCAGCCCT CGGGGCAGCG CGCGATGCTG GTGGGCGACA ACTCCGCAGC CCCCTTGATC GACTTCATCG AAGCGCCCGA GCAGGTGCGC GCCGGCGACC GGGTCGTGAC ATCCGGGGAT GGCGGGGTCT TTCCCGCCGA GTTGCTGGCG GGCCAGGTCG CCATCGGTCC GGATCGCCGG TTCCGCCTGC GCCTCGCGGC GGATTACGAG CGACTGAAGT TTCTGCGCGT CCTGCGCGGC CAGCCGACCC CGGCCCTGCC CGAGGCCGCC CCGATCGACG GGATCGACAC GCCACCCATC GCTGCCCTGG AGGAACGCGC CGATGGGTAG
|
Protein sequence | MARHRNEDDI YFKPIRRVLI GCLVVVLLGL FAFWRIDSPR VEQMRMSVIE RVVPNLDWVM APITAVSRMA EDFQSYARLF EQNEELRREL QQMKAWREAA LQLEQENAQL LGLNNVRIEP ELTFITGVVT ADSGSPFRRS VLLNVGSEDG VQDGWATMDG LGLVGRIAGT APSVARVLLL TDPSSRVPVI LQPSGQRAML VGDNSAAPLI DFIEAPEQVR AGDRVVTSGD GGVFPAELLA GQVAIGPDRR FRLRLAADYE RLKFLRVLRG QPTPALPEAA PIDGIDTPPI AALEERADG
|
| |