| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0579 |
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| Symbol | betT |
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| ID | 5712032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 569219 |
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| End bp | 570778 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641266481 |
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| Product | choline-glycine betaine transporter |
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| Protein accession | YP_001531926 |
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| Protein GI | 159043132 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACA CGACACGGAC ACCGGGCCTT GCGCCCAAGG GCGCGGACAA GGCGCTGTTT
GCCGTCACGG GCGGGTTCAT CGCCCTGTTT TGCGCCTATG CACTCTTCGA CATCGAAGGG
CTATCGGCCC TCGTGGACAC AAGCTTTGCC TTTTCGGCCA AGTATTTCGG CTTGTATTGG
CAGGTTTTGC TGCTCGCCAC CTTCCTGATC GGGTTGGTCC TGTGCTTTCT GCCCGGATCG
AGGACTCTGA TGGGCGGGCT GAGCACGCCG GAATTCGGCA CTTTCAGCTG GGCCGCGATG
ATCATGTGCA CCCTGCTTGC GGGCGGTGGC GTTTTCTGGG CCGCGGGCGA GCCGATTGCG
CATTTTCTGT CCACACCGCC GGTCTTTGGC GACCTGAGTG GTGACGTGCA GGCGCAAGCC
CATGCCGCCC TCGCACAAAG CTTCCTGCAT TGGGGGTTTC TGGCCTGGGC GATCCTGGGC
TCGCTGACCA CGGTCATGTT GATGCACTAC CACTACGACA AAGGGCTGCC TCTGGCACCG
CGTACTCTAC TGTATCCGCT GTTGGGTGAC CGCGCGCTGA GCGGTCCAAT TGGCCTGATT
GCGGATGCGT CCTGCATCAT TGCCGTGGTC GCAGGCACCG TCGGCCCGAT CGGGTTTCTC
GGGTTGCAGA TGTCTTACGG GCTCAACGAT TTGACGGGCA TCCCGGACAC CTTCGCCACC
CAAGCCATCG CGATCCTGGC GCTTGTGGGA CTTTACACCG TGTCCGCGAT CACGGGGCTG
GCGAAAGGCA TCAAGATCCT GTCGCAGATC AACGTGCTTC TCGCGGTGGT ACTGCTGATC
TTCATGCTGG TCGCCGGTCC CACGATGAAC ATCTTTGCGG GCTTCTTCGG TGGAATGCAG
GTCTATGCCA CGCATTTCTT TGACATGGCG ATGTATCGCG GCGATGCGGG CCTGTTTGGC
GATGCCGGAT GGCTGGGATG GTGGACCGTG TTCTTCTGGG GCTGGTTCAT GGGCTACGGT
CCCTTGATGG CCGTGTTCAT CGCACGTATC AGCCGCGGCC GTTCGATCCG GCAAATCATC
ATCACCCTGT CTATTGCAGC GCCCCTGATC ACGAACTTCT GGTTCACGAT TATCGGCGGG
TCCGGCATCT TCTTCGAGAT CGCCGAGCCG GGCGTCGTCT CTGGCCCGTT CGAAGGGTTC
AACCTGCCCG CAGGCCTGCT TGCGATCACC CAGGCCATGC CCATGGGACT GATCCTGTCT
GTACTGTTTC TTGTCCTGAC CATGTGCTTT GTCGCCACGA CGAGCGACTC GATGAGCTAC
GTGATCTCGT CGACCATGAC CGACGGAGAG CCCTCGACTG CCATGCGCGC CTTTTGGGGT
CTGGCCATGG GGGTGATGGC GCTGATCCTG ATTTCCACCG GAGAAGGAGG CATTGGCAAG
CTCCAGAGCT TCATCGTGGT GACGGCGGTG CCGGTATCGC TGATCCTGCT ACCTTCCCTG
TGGGACGCGC TGCGTATTAC GTGGATGCTG GGGCGCACGC CCGAGGCGAA GCACGCCTGA
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| Protein sequence | MSDTTRTPGL APKGADKALF AVTGGFIALF CAYALFDIEG LSALVDTSFA FSAKYFGLYW
QVLLLATFLI GLVLCFLPGS RTLMGGLSTP EFGTFSWAAM IMCTLLAGGG VFWAAGEPIA
HFLSTPPVFG DLSGDVQAQA HAALAQSFLH WGFLAWAILG SLTTVMLMHY HYDKGLPLAP
RTLLYPLLGD RALSGPIGLI ADASCIIAVV AGTVGPIGFL GLQMSYGLND LTGIPDTFAT
QAIAILALVG LYTVSAITGL AKGIKILSQI NVLLAVVLLI FMLVAGPTMN IFAGFFGGMQ
VYATHFFDMA MYRGDAGLFG DAGWLGWWTV FFWGWFMGYG PLMAVFIARI SRGRSIRQII
ITLSIAAPLI TNFWFTIIGG SGIFFEIAEP GVVSGPFEGF NLPAGLLAIT QAMPMGLILS
VLFLVLTMCF VATTSDSMSY VISSTMTDGE PSTAMRAFWG LAMGVMALIL ISTGEGGIGK
LQSFIVVTAV PVSLILLPSL WDALRITWML GRTPEAKHA
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