| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0552 |
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| Symbol | |
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| ID | 5712005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 539277 |
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| End bp | 539843 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641266454 |
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| Product | sugar isomerase |
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| Protein accession | YP_001531899 |
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| Protein GI | 159043105 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation |
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| TIGRFAM ID | [TIGR03127] 6-phospho 3-hexuloisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTTGG CTCTCGACGG GCTTGCAGAT CGATTGCTGG ACGAGCTTCG TCCCGGTCTT
TCGGCCGAGG TGCTGGCGCA GGTCGCGACA TTGTCGCAGG CGTTGGCAGG TGCGAAGCGC
ATCTTGTGTT ACGGCGTCGG TCGTGAAGGC CTGATGATGA AGGCGCTTGC CATGCGGCTT
TATCACCTGG GCTGCGACGC ACATGTCGTT GGCGACATGA CGGCGCCTCC GGTGGGACAG
GGCGATCTGT TGTTCGTCAG CGCCGGTCCC GGCCAGTTTG CGACCGTCGC AGCGCTGGTC
GAGGTCGCCA GATTGAGCGG AGCCGCTACC ATTTGCATCA CCGCGGAACC AGGCGGTGCG
GTACCGCGAA GTGTCGATGC TTGTGTGACC TTGCCGGCTC AGACGATGGC TGCAGATCAG
GGAGACAAGA CCACCTCGAT CCTGCCCATG GGCTCGCTCT ACGAGGTATA CATGTTTCTG
TTCTTCGAAA TCCTCGTGCT CGATTTGCGT GCCCTTATGG AGGTCGCGCC TGAGGCCATG
CGCGCCAATC ACACAAACCT GGAATAG
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| Protein sequence | MTLALDGLAD RLLDELRPGL SAEVLAQVAT LSQALAGAKR ILCYGVGREG LMMKALAMRL
YHLGCDAHVV GDMTAPPVGQ GDLLFVSAGP GQFATVAALV EVARLSGAAT ICITAEPGGA
VPRSVDACVT LPAQTMAADQ GDKTTSILPM GSLYEVYMFL FFEILVLDLR ALMEVAPEAM
RANHTNLE
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