| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0528 |
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| Symbol | araH2 |
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| ID | 5711981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 512265 |
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| End bp | 513269 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641266430 |
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| Product | ribose/xylose/arabinose/galactoside ABC-type transport system protein |
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| Protein accession | YP_001531875 |
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| Protein GI | 159043081 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACAT CTGTGAAAGA CTTCACCGCC AGCCCGGAGT TCCGGTTGCT GATCATCATG
GTTTTTGTCT TCGGCTTGAT GTCAGTCCTG TCGCCGGATC GCTTTCTGTC ATCTCAGAAC
CTGACCTCGA TGGCGTTTCA GTTTCCCGAG TTCGCGATCC TCGCACTGGC CATGACCATC
GCCATGATGA CCGGCGGGAT CGACCTCTCG GTGGTGGGCA TCGCCAACCT GTCGGCGGTT
GTCGCCGCAC TGATCCTCAC CCATTTTTCG AATGCCGAAA TGCCCGCCGC GCAATCCGCG
ATCTGGCTCG CAATCGCGAT CACCGCAGCG CTGTGCATCG GGGCGATTGC CGGTTTGATC
AACGGATCGC TGGTGGCATT CTTCGGCCTT CCGCCCATTC TCGCCACCCT GGGATCCGGT
CTTGTGTTTA CCGGTTTTGC CATTGCGATG ACCGGTGGCA GCGCAGTCAT GGGCTTTCCC
GACACGGTCG CCTTGATCGG AAACGCGACC TTGGCGGGTG TGCCTGTCCC TCTCATCCTG
TTTGCGGTTC TGGCGTTCCT GCTGCACCTG GTCCTGACCC GCACCGCCTT CGGATTGCGC
GTGACGATGT ACGGGGCCAA TCCGCTCGCG GCGCTTTATG CCGCCATCGA CATCAACCGC
ATGCTGCTCA AGGTCTACGT GATCGCCGGG ATGTTCGCGT CGGTTGCCGG GCTCATCATA
ATGAGCCGTG CCAATTCAGC GAAGGCCGAT TACGGGTCTT CCTACCTGCT GCTGGCGGTT
CTGATCGCCG TGCTGGGCGG GGTGAACCCC TATGGTGGCT ATGGTCGCGT CATTGGCGTG
GTGTTGGCGG TGCTGTCTAT GCAGTTCCTG TCCAGCGGCC TGAACATGCT TGGGGTGTCA
AATTTCGCAC GCGAGTTGAT CTGGGGCGCG CTGCTAATCC TCGTCATGGT GATCAACACC
CATGCCGTGA CCGCCCTGCG CAGTAGCCTG AAGCCACCAA AATAA
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| Protein sequence | MNTSVKDFTA SPEFRLLIIM VFVFGLMSVL SPDRFLSSQN LTSMAFQFPE FAILALAMTI
AMMTGGIDLS VVGIANLSAV VAALILTHFS NAEMPAAQSA IWLAIAITAA LCIGAIAGLI
NGSLVAFFGL PPILATLGSG LVFTGFAIAM TGGSAVMGFP DTVALIGNAT LAGVPVPLIL
FAVLAFLLHL VLTRTAFGLR VTMYGANPLA ALYAAIDINR MLLKVYVIAG MFASVAGLII
MSRANSAKAD YGSSYLLLAV LIAVLGGVNP YGGYGRVIGV VLAVLSMQFL SSGLNMLGVS
NFARELIWGA LLILVMVINT HAVTALRSSL KPPK
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