| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0522 |
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| Symbol | deoR3 |
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| ID | 5711975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 507247 |
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| End bp | 508206 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641266424 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001531869 |
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| Protein GI | 159043075 |
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| COG category | [K] Transcription |
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| COG ID | [COG2390] Transcriptional regulator, contains sigma factor-related N-terminal domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAATGG CATCGCGTGA CGACGCCCTG TTTGTCGAAG CGGCATGGCT CTACTACCAT
GACGGGTTGA ACCAGACCGA AATTGCCGAA CGTATGCGGA TCAGCCGCGC ATCGGTGGTG
AACTACCTTA ATGAAGCCCG CACGAGGGGC TGGGTGCGGG TGCATCTCGA CAGCGATGTT
TTCCGAGGGC ACCGCCTGGC GGCAGAGCTT TGTGCGCTCT TTGGGCTGAC CGATGCCTTG
GTTGTGCCGG ACGATCCGCT CGATCCCGAA GGAGCCGCGG CCAGCGTCGC ACGGGTGACC
CGGACCGCGG CGGACTGGCT GCCACGTTTG CTGGAGCCGG GCGACCGTTT GGGGGTGTCC
TGGGGGGCGA CCATTTATCA GATGGCGCAG CAGGTGCCTA ACGCCCCGGT ACCCGATCTG
AGGGTCATTC AACTTCTGGG GTCACGTCCC GCGGCACTCG GATTTGCCGC CGAGGCTTGC
ACGGCGATGT TGGCGCAACG TCTGGGGGGG GAATGCATCA ACTTGCATGT GCCCCTCGTA
CTCTCGAACA AAGCGCTGCG CGATGCTTTG TGCGACGAGC CGGTGGTCCG GGAACAGCTG
GAGGCGCTGG CGAGTTGCAA CAAGACGGTG CTGGCTTGTG GGACCTGTGA TGCCGACGCG
CATGTGGTGC GGAGCGGTAT CGTGACCTCG GACAGTATCT CGGACTACCG CGCCAAAGGC
GCAGTTGGCG TGATCTGCGG ACGCCTGATC GACGTTAAGG GACAACCGGT GGTGGCCGAG
GTCGAGGACC GCATGATCGG AGTGACTCTT GATCAGATGC GAGGCAAGGA CATGGCGCTT
TTGGTTGCCG CAGGACCGGG GCGCGCAGCT CCGGCAAAGG CCGCAATCAA GGGGGGATTT
GTCACCCATC TGGTAACCAG CAAGCGCATC GCAGAAGACC TGTTGGAGAC GGCACCATGA
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| Protein sequence | MRMASRDDAL FVEAAWLYYH DGLNQTEIAE RMRISRASVV NYLNEARTRG WVRVHLDSDV
FRGHRLAAEL CALFGLTDAL VVPDDPLDPE GAAASVARVT RTAADWLPRL LEPGDRLGVS
WGATIYQMAQ QVPNAPVPDL RVIQLLGSRP AALGFAAEAC TAMLAQRLGG ECINLHVPLV
LSNKALRDAL CDEPVVREQL EALASCNKTV LACGTCDADA HVVRSGIVTS DSISDYRAKG
AVGVICGRLI DVKGQPVVAE VEDRMIGVTL DQMRGKDMAL LVAAGPGRAA PAKAAIKGGF
VTHLVTSKRI AEDLLETAP
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