| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0517 |
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| Symbol | araF2 |
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| ID | 5711432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 501109 |
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| End bp | 502149 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641266419 |
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| Product | ribose/xylose/arabinose/galactoside ABC-type transport system protein |
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| Protein accession | YP_001531864 |
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| Protein GI | 159043070 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAGAC GTCACTTCAT GGCCTTTGCA AGTGCGGCAA GTCTTGCGCT TGGCGCGGGC
GCCGCAACCG CGCAGGAGGC ACCTGCCCCA TTGGACACTC CCGAAGAGGT CACTATCGCG
CTGGTGCGCT ACCTGTCCAC CGGCGATTTC TTCCAGGCCT ACCTGTCAGG CGTCGAAACG
CAGGCCGCGG CACTTGGTGT GAACCTGCGC GTGTTCGACA GTCGCCAGGA TGCCGCCTTG
CAGGCAGACA TGGTCGACCA GGCCATCGCG CTTGGCGTGG ACGGGATCAT CATCCAGCAC
GGTCTCACGG AATCCATGCG GGAAGCCGCA CAGCGCGCGG TGGATGCGGG GATCAAGGTT
GTGGCGTTCG ACGTGAATGT CGAGAACGCG GCTATTCCGC AGGTCGAGCA GTCCGATTAT
CTGCTCGGCA AGTTGGCTCT GGAACAGGCG ATCAAGGACA ATGGCGACAG CTTTGCCGCT
GGCTATGTCT ACGTCCCGGG CATCGCGCCG CTCGACCGCC GCCACGCGGC CTGGGAAGAA
GTGAAAACTG CCAATCCAGG CATCACCGAA GAAGCGCGGA TCGGCACGCT CGACAATCCG
ATCGCGAATG CCAATGCCAA CCAGGCACGC GCGGCTCTTC AGGCCAACCC GAACATCTCG
GTCTTCTTCG CCCCCTATAA CGAGTTCGCC AAAGGCGTGA AAATCGCCGC GGACGAATTG
GGCCTGAGCG GCGAGATGAG CATCTACTCG GCCGATATTT CCACCGCGGA CATCGCGCTC
ATGCGCGAGC CGGGCAGCGC TTGGAAGGCC ACGGTTGCCA CCAACCCGGC CGTTGTCGGG
GAAGTGTCCG TGCGCGCGCT TGCCCTGATG CTGGCCGGCG AGGATCCCGG CGCGTCTGTG
ATCGTGCCGC CGACTCTCAT CACGCAGGCT TTTCTCAACG ACAATGACAT CCGCAACATG
GAAGACCTCG GTGCCAAGAT GCCTCAGTTT CAGCACGCGG ATGTTGCGAT GGCCGATTGG
ATGCCTCTGC CCGCACGCTG A
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| Protein sequence | MLRRHFMAFA SAASLALGAG AATAQEAPAP LDTPEEVTIA LVRYLSTGDF FQAYLSGVET
QAAALGVNLR VFDSRQDAAL QADMVDQAIA LGVDGIIIQH GLTESMREAA QRAVDAGIKV
VAFDVNVENA AIPQVEQSDY LLGKLALEQA IKDNGDSFAA GYVYVPGIAP LDRRHAAWEE
VKTANPGITE EARIGTLDNP IANANANQAR AALQANPNIS VFFAPYNEFA KGVKIAADEL
GLSGEMSIYS ADISTADIAL MREPGSAWKA TVATNPAVVG EVSVRALALM LAGEDPGASV
IVPPTLITQA FLNDNDIRNM EDLGAKMPQF QHADVAMADW MPLPAR
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