| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0510 |
|---|
| Symbol | |
|---|
| ID | 5711426 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | - |
|---|
| Start bp | 495589 |
|---|
| End bp | 496662 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641517179 |
|---|
| Product | conserved hypothetical beta-lactamase |
|---|
| Protein accession | YP_003422323 |
|---|
| Protein GI | 284928590 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2015] Alkyl sulfatase and related hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.618427 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGGCA CCGAGGCCGA GGTCATGTTC GCCTCGCACC ACTGGCCACG ATTCGGCAAC
GAACGCATCC AAGAGGTGCT GCGCGCACAG CGAGACCTGT ACGCGAACCT GAACAGCCAG
GTGCTGCACT TTGCCAATCA GGGCGTCACG ATCAACGAGA TCCACAACGT CTACGAACCG
CCCGAGAGCA TCGCGAACAA CTGGTTCAAC CGTGGCTACC ATGGCTCGGT CGAGCACAAC
GTACGCGCGG TGATCAACCG CTACCTCGGC TACTGGGATG CCAACCCGGC CACGCTAATC
CCGCTGTCAC CGGCGGATTC CGCTCCGCTT TATGTGGAGA TGATGGGCGG TGCGGACGCG
ATCCTCGCCA AGGGGCAGCA GCTGTTCGAC ACCGGGCAGT ATTTCCACGC CGTCGAGATC
CTGAACAAGC TTGTCTATGC CGAGCCGGAC AACGCTGCTG CCAAGGACCT ACTGGCCGAT
AATTTCGAGC AGATCGGCTA CCAGCAGGAA AACCCCGGCC TGCGCAACAG CTTCCTCGCC
GGCGCCTATG AGCTGCGCTC CCCTCTGCCC ACGGGCACTG CGACCGAAAC CGCAACGCCG
GACGTGATCC AGGCGATGCC CACGGGGCTG TTCCTGGACT ACATCGCGAT CAAGATGGAC
AGCCGGAAAG CGGGCGATAC CGAGTTCACG ATCAACATCG TGCATCCCGA CATCGAGGAG
GAATACATCC TCGAACTGAG CAACGCCACT CTGACAAATA TCGAAGGCTA CCAGGTCGAG
ACCCCCGACC TGACCCTCAC GATCGACCGC GCGCAGCTAG TTCCGGTCAT GATCGGCAAG
GCGACCATCG ACGCACAGAT CGACGCCGGG AATGCTCAGG CCGAGGGCGA TCGGTCAGTG
TTGACGCAGC TGGCTTCGCT GCTGACCGAC TTCGAGATGA CCTTCGAGGT CATGCCGGGC
ACCGAAGGCG CTGCGGCCGT TCCGGGGCGC TATGACCCTG AGGCAGGCCC CAGTGGGGTC
GAGGGCAACC CCTTCCAGGT CAAAACGGTC AATGCCGGGG AACTGCCCAA CTGA
|
|---|
| Protein sequence | MFGTEAEVMF ASHHWPRFGN ERIQEVLRAQ RDLYANLNSQ VLHFANQGVT INEIHNVYEP
PESIANNWFN RGYHGSVEHN VRAVINRYLG YWDANPATLI PLSPADSAPL YVEMMGGADA
ILAKGQQLFD TGQYFHAVEI LNKLVYAEPD NAAAKDLLAD NFEQIGYQQE NPGLRNSFLA
GAYELRSPLP TGTATETATP DVIQAMPTGL FLDYIAIKMD SRKAGDTEFT INIVHPDIEE
EYILELSNAT LTNIEGYQVE TPDLTLTIDR AQLVPVMIGK ATIDAQIDAG NAQAEGDRSV
LTQLASLLTD FEMTFEVMPG TEGAAAVPGR YDPEAGPSGV EGNPFQVKTV NAGELPN
|
|---|
| |