| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0504 |
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| Symbol | fdnG |
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| ID | 5711420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 487314 |
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| End bp | 490274 |
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| Gene Length | 2961 bp |
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| Protein Length | 986 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641266408 |
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| Product | formate dehydrogenase alpha chain |
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| Protein accession | YP_001531853 |
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| Protein GI | 159043059 |
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| COG category | [C] Energy production and conversion
[R] General function prediction only |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing
[COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGTCA AACGCAGATC GACAGACGCG CGCCGTAGTG GCCTCGCGGC CTTTGCGCAG
AACGTTTCCG CCAAGCCTGT GGACCGCCGC AGCTTCCTGA GATCCTCCGG ACTGGCCGTG
GGTGGCCTTG CGGCGCTGGG GACGGTCGGT GCCACGACGG TGCGTCGCGC CGAGGCTGGC
ATGACGGACT TCAGCCAGCC GGTCGAGATC AAGACCAATA TCTGTACCCA CTGTTCGGTG
GGCTGCACCG TGCTCGCCGA AGTGCAAAAC GGGGTCTGGG TCGGTCAAGA ACCGGCATGG
AAAAGCCCGA TCAATCGGGG CACCCACTGC GCCAAGGGCG CGTCGGTGCG CGAGTTGGTG
CACGGCGACC GCCGCCTGAA ATATCCGATG AAGAAGGAAA ACGGCGCATG GGTCCGGATT
TCCTGGGATC AGGCGATCGA CGAGATCGGC GACAAGATGC TCGACATCCG CGAGAAACAT
GGCGCCGACA GCGCCTATTT GCTCGGCTCG GCCAAGTTCT CCAATGAGGG CGCGTATCTC
TTCCGCAAGT TCGCGGCGTT TTGGGGGACC AACAACGTCG ACCACCAGGC GCGGATCTGT
CACTCGACCA CGGTCGCAGG TGTTGCGAAC ACCTGGGGCT ATGGCGCGAT GACCAACAGT
TACAATGACA TCCGCAACTC CAAGACGATC ATCTTCATGG GCTCCAACGC GGCCGAGGCG
CACCCCGTTT CGCTGCAGCA CATCCTGACG GGCAAGGAGA CCAACCGCGC CAATGTCATC
GTGATCGACC CGCGCTTCAC CCGCACGGCC GCCCACGCCA CGGATTACAT CCGCATGCGT
CCGGGCACCG ATATCGCCGT GATCTGGGGT ATCATGTGGC ACATTTTCGA GAACAACTGG
CAGGACCAGG AGTATATCGA TCAGCGTGTC TGGGGCATGG ACCAGATCCG CGAAGCGGTC
AAAGCCTACC CGCCCGCAGA GGTGGAGCGC ATCACCGGCA TCGGTGAGGC GGAACTGCGC
CGCGTCGCGG AAACCTTCGC CACCCAAGGC CCTGCAACTT TTATCTGGTG CATGGGCGGC
ACGCAGCACA CGGTCGGCAC GGCCAACGTG CGCACCTATT GCAACCTGCT TCTGGCAACC
GGCAATGTCG GCTCCAACGG GTCGGGCGCC AACATCTTCC GCGGCCACTG TAACGTTCAG
GGTGCCACGG ATTTCGGCCT CGATATCGGG TCGCTGCCTT GCTACTACGG TCTGTCCGAG
GGCGGCTGGC GCCATTGGTC GCGTGTCTGG GAAGTGGACT ACGACTACCT GCAGGCGCGC
TTCGACGAGG TGCCGGCCAA AGGCGGTCGC GATGCGCGCG ATCGCAAGGC GAACATGGAA
ATGGCCGGGA TCCCGTCGAC CCGCTGGTTC GATGCGACCA CCCTTGACGC GGAGGACGTC
GATCAGCGCG ACAACATCAA GGCGATGATC GTCTTCGGTC ACGGCGGTAA CACGGTGCCG
CGGATGGGCG ACAGCCTCAA GGGGATGAAC GCGCTCGATC TGCTGGTCGT CGCGGACCCG
CATCCCACGA CATTCGCTGC CCTCCACGAT CGTCCCGACA ACACCTACCT GTTGCCGATC
TCGACACAGT TCGAATGCGA TGGCAGCCGG ACGGCCTCGA ACCGCTCGGT GCAATGGGGC
GAGAAAGTCG TCGAGCCCAT CTTCGAGAGC GACAACGACT ATGCCGTGAT CTACCGGCTG
GCCGAAAAGC TCGGCTTTGC GGACGAGATG TTCAAGAACT ACGAGATGGT TCAGGGCAAG
TTCTCGATGG AGCCCACGGC CGAATCCGTC CTGCGCGAGA TCAACCGCGG TGGCTGGTCC
ACCGGCTACA CCGGGCAGAG CCCCGAACGG CTCAAGGCGC ATATGGCCAA CCAGGACAAG
TTCGACCTGG TCACTCTGCG CGCGCCCGCG GATGCGGGCG ACGTGGCCGG CGATTTCTAC
GGTCTGCCCT GGCCCTGCTG GGGGACGCCG GAGTTCAAGC ATCCCGGCAC GCATATCCTC
TACAACCCGA ACGTGCCGGT CAAAGAGGGC GGCGGTGGCT TCCGTCCCCG CTTCGGTCTC
GACCGGGACG GCGAGACCTT GTTGGCGGAG GGGTCGTATC CGGTTGGCTC CGAGATCGAG
GACGGGTATC CGCAGTTCAC CTATGGTATC CTTCAGAGCC TCGGCTGGGA CAGCGATCTG
ACCGCGGAAG AGCTGGCCAC CATCCAGCGC ATCGGCGGCA ACGATCCCGA GGCGATGGCC
AATGTGAGTT GGTCGCTCGA CCTGTCCGGC GGGATCCAGC GTGTCGCGAT CGAGCACGGC
TGCGTGCCCT TCGGCAACGG TAAGGCCCGC GCCGTGGCGT GGAACCTGCC CGACCCGATC
CCGGTGCACC GCGAGCCGAT CTATTCGCCG CGCCCGGACC TCGTGGCCGA CTACCCGACC
CGCGATGATG GTCGCCAGTT CCGTGTGCCG AACATCGGCC ACACGATGCA GGCCTCTGCC
GTCGAGCGCA ATCTGTCCGA GAGCTTCCCG ATCGTTCTGA CCTCCGGCCG TCTGGTCGAG
TATGAGGGCG GTGGTGAAGA AACCCGGTCG AACCCTTGGC TCGCCGAATT GCAGCAGGAC
ATGTTCGTGG AGATCAACCC GGCGGACGCA GAAGCCAGGG GCATTTCCGA CGGCGGTTGG
GTCTGGGTCT ATGGCCCGGA AAACGAAAGC AAAACCCGCG TCAAGGCCTT GGTGACCGAA
CGCGTGGCGG AGGGCGTGGC CTTCATGCCG TTCCACTTCG CGGGCTGGTT CCAGGGTGAA
GACCAACGGG GCAACTACCC CGAGGGCACC GACCCCATCG TCTTGGGCGA GAGCGTCAAT
ACGGTCACAT CCTATGGATA TGACCCGGTA ACAGGCATGC ATGAAGGCAA AGTCACACTT
TGCCAAATTG CAGCGGCCTA A
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| Protein sequence | MLVKRRSTDA RRSGLAAFAQ NVSAKPVDRR SFLRSSGLAV GGLAALGTVG ATTVRRAEAG
MTDFSQPVEI KTNICTHCSV GCTVLAEVQN GVWVGQEPAW KSPINRGTHC AKGASVRELV
HGDRRLKYPM KKENGAWVRI SWDQAIDEIG DKMLDIREKH GADSAYLLGS AKFSNEGAYL
FRKFAAFWGT NNVDHQARIC HSTTVAGVAN TWGYGAMTNS YNDIRNSKTI IFMGSNAAEA
HPVSLQHILT GKETNRANVI VIDPRFTRTA AHATDYIRMR PGTDIAVIWG IMWHIFENNW
QDQEYIDQRV WGMDQIREAV KAYPPAEVER ITGIGEAELR RVAETFATQG PATFIWCMGG
TQHTVGTANV RTYCNLLLAT GNVGSNGSGA NIFRGHCNVQ GATDFGLDIG SLPCYYGLSE
GGWRHWSRVW EVDYDYLQAR FDEVPAKGGR DARDRKANME MAGIPSTRWF DATTLDAEDV
DQRDNIKAMI VFGHGGNTVP RMGDSLKGMN ALDLLVVADP HPTTFAALHD RPDNTYLLPI
STQFECDGSR TASNRSVQWG EKVVEPIFES DNDYAVIYRL AEKLGFADEM FKNYEMVQGK
FSMEPTAESV LREINRGGWS TGYTGQSPER LKAHMANQDK FDLVTLRAPA DAGDVAGDFY
GLPWPCWGTP EFKHPGTHIL YNPNVPVKEG GGGFRPRFGL DRDGETLLAE GSYPVGSEIE
DGYPQFTYGI LQSLGWDSDL TAEELATIQR IGGNDPEAMA NVSWSLDLSG GIQRVAIEHG
CVPFGNGKAR AVAWNLPDPI PVHREPIYSP RPDLVADYPT RDDGRQFRVP NIGHTMQASA
VERNLSESFP IVLTSGRLVE YEGGGEETRS NPWLAELQQD MFVEINPADA EARGISDGGW
VWVYGPENES KTRVKALVTE RVAEGVAFMP FHFAGWFQGE DQRGNYPEGT DPIVLGESVN
TVTSYGYDPV TGMHEGKVTL CQIAAA
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