| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0493 |
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| Symbol | ssuB1 |
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| ID | 5711409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 478002 |
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| End bp | 478751 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641266397 |
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| Product | sulfonate/nitrate/taurine transport system ATP-binding |
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| Protein accession | YP_001531842 |
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| Protein GI | 159043048 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.187647 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.442901 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCC TGCAGCTCTC GGGCATTGGC CACGCCTTTC TGGGCCGTAC CGTACTCGAC
ACGATCGACC TGAGCGTGGC TCAAGGCGAG ATCGTCGCTC TCGTCGGACC CTCCGGCTGT
GGCAAATCCA CCCTCGCCCA TATCGCCGCC GGGTTGATCG AGGCCAGGGC CGGTCGGATC
TCCCACGGTT ACACGCGCCA TGCGATGATC TTTCAGGACC CCGCCCTGAT TCCCTGGGCC
ACGGCGGCGG GCAACATCGA CTACGTGCTG CGGATGGCGC GGGTACCACG TGCTGCGCGC
CCGACGCGCA TCGCGCAGGC CGCCGCGCAG GTCGCGCTCC TGGCGGAGGA CCTGAACAAA
TACCCGGTGG AGTTGTCCGG CGGCATGCGG CAGCGTGTGG CCATCGCCCG CGCCCTCGCT
ATCCGGCCCG ATTTCATCTA TTTCGACGAA CCCTTCACCG CGCTCGACGT GGCACTGAGG
CGCCGCATGC AGGATCTGGT CATCGCGACC TGCGCCGGAG GCCACCTGTC GGGTCTGTTC
ATCACCCATG ACCTGTCCGA AGCTGCCCGG ATCGCCCATC GCATCGCCGT GTTGGATACA
CATGGGCGCG GGATCCTCGG CCACCGGCCC CTTATCGGAA ACCCGTGCGA CCGGAGCGAC
GACGCGGTCT TCGACTGGGT CCAGACAGCC ACCCACACGG ATCCGATCTT CCGACACATC
CACGATGTCG ATGAAAGGCA GGTCGCATGA
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| Protein sequence | MTTLQLSGIG HAFLGRTVLD TIDLSVAQGE IVALVGPSGC GKSTLAHIAA GLIEARAGRI
SHGYTRHAMI FQDPALIPWA TAAGNIDYVL RMARVPRAAR PTRIAQAAAQ VALLAEDLNK
YPVELSGGMR QRVAIARALA IRPDFIYFDE PFTALDVALR RRMQDLVIAT CAGGHLSGLF
ITHDLSEAAR IAHRIAVLDT HGRGILGHRP LIGNPCDRSD DAVFDWVQTA THTDPIFRHI
HDVDERQVA
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