Gene Dshi_0479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0479 
Symbol 
ID5711395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp464118 
End bp464666 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content63% 
IMG OID641266383 
Producthypothetical protein 
Protein accessionYP_001531828 
Protein GI159043034 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.678283 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGGA GGCTGGCCCT TCTGCTGTGG CTGCCGCTGG CGGCCGCTGC GCAGCCGGTG 
CCGGAGCCCG AAGACTACAG AATGGATCAT TACCGCGCTC CGGTTCCGGC AACCCTGAGT
GGGGCGGCGG TCGTGGGACC GGAAGCTGCT TATGCCCTCT GGCTCGGAGG CGAAACGGTA
TTCATCGATG TGATGCCCCA GGCACCGAGG CCCGCGAATT TGCCAGAGGG TACGCTCTGG
CGGGACAAGC CGCGCTATTC GATCCCGGGC TCCATATGGT TGCCCAACGT GGGCTATGGT
GCGTTGGCCG AGATCACGGA GCAGTACTTT CGCGATGGCC TCGCGCGGGC CACCGGGGGT
GAGAAGACGC ATCCGATCCT GCTGTTTTGT CTCGAAGATT GCTGGATGAG CTGGAACGCT
GCGAAGCGCG CGCTCGCTTG GGGTTATACT GCGGTTCATT GGTTGCCAGA GGGCAGCGAT
GGCTGGATGC TTTGGGACTA TCCGCTGGAG CGTATCACTC CTGAAGAGCC GCAGCCTCAA
TCGAACTGA
 
Protein sequence
MIRRLALLLW LPLAAAAQPV PEPEDYRMDH YRAPVPATLS GAAVVGPEAA YALWLGGETV 
FIDVMPQAPR PANLPEGTLW RDKPRYSIPG SIWLPNVGYG ALAEITEQYF RDGLARATGG
EKTHPILLFC LEDCWMSWNA AKRALAWGYT AVHWLPEGSD GWMLWDYPLE RITPEEPQPQ
SN