| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0477 |
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| Symbol | cccA |
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| ID | 5711393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 462744 |
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| End bp | 463289 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641266381 |
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| Product | cytochrome c protein |
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| Protein accession | YP_001531826 |
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| Protein GI | 159043032 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGATGC GCTCCGCAGC CCCCCTCGCG ATAGTCGCAG CCGCCACGGC CGCCCTGACC
GCGACAGTTG TTTTCGCGGC AAACTGGTCC GATCAGGATG TGGATCCTGA AGGGGACTAT
CCGGAAGTTC CGGTCGCCTA TTCCGAGGGT GGCCGCTATT TCACCGAAGA CGATATCCCG
ACCTTCAACA TCGCCGAAGA CGGCACCGTC GACTGGCTGA CGTTCAACGG TTTCCGCCGC
TATCATGCCG AGTGTCATGT CTGCCACGGC CCGGACGGCG AAGGGTCGAC CTATGCGCCG
AAGATCAAGA ATTCCGCCAT CCACATGGGC TATTACGACT TCTACGATGT CGTGGTGAAT
GGCCGCGCGG TTGGCAACTC CGTCATGCCC CATTTCGGCG ACAACAGGAA CGTGATGTGC
TATCTTGATG ATATCTATGT GTATCTCAAA GCACGCGCCG TGGATGCCGT ACCGCGCGGT
CGCCCCGCCA AAAAGGAAGC CAAGAGCGAC ATGATCCGCG AGGAAGAAGA TGGCTGCATG
GGCTGA
|
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| Protein sequence | MMMRSAAPLA IVAAATAALT ATVVFAANWS DQDVDPEGDY PEVPVAYSEG GRYFTEDDIP
TFNIAEDGTV DWLTFNGFRR YHAECHVCHG PDGEGSTYAP KIKNSAIHMG YYDFYDVVVN
GRAVGNSVMP HFGDNRNVMC YLDDIYVYLK ARAVDAVPRG RPAKKEAKSD MIREEEDGCM
G
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