Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0457 |
Symbol | |
ID | 5711373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 443992 |
End bp | 444900 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641266361 |
Product | protein of unknown function DUF58 |
Protein accession | YP_001531806 |
Protein GI | 159043012 |
COG category | [R] General function prediction only |
COG ID | [COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGACG CGCTCTCCGC GCCGGGGGTT GCGTTGCGGC CGGACCCCTT GATCGCGCTG CGCCGCATGG TGCTTGCGGC GAAACCGCCA CAGGTGACCG CTGCGCTGCC GGGCGGGTTT GCGACAAAGC GAAAGGGTCA TGGCCTCGAG GTGGCGGATT TGCGCGAATA CGTGGCAGGC GACGATATCC GCCATCTGGA CCGGGGCACA ACGGCCCGCA CCGGGCGGCT CCATATTCGC CAGTTTCAGG AAGAGCGCGA TCGAGTCACC TTGCTCGTTC CCGATTTCCG CCCGGCCATG CTCTGGGGGG TGCGCCGGGC CTTTCGATCG GTCGCGGCGG CTGAAGCGCT GGCTCTTATC GGCTGGAACG TGATCGAGAG CGGCGGGCGG GTCGGGCTCA TGACGCTGGG GCAAGGGCCA CCGGTAATCG TGCCGCCGGC GGGGCGTGTG CGGGGCATGC TCAAACTCAT CGGCGGGCTG GTGCGTGCAC ATGAGGCCGC TCTGGCGGGC ATGGCGGCGG GGCAGGGGCA GGACCAGCAC CTCGACCTGG CCCTGTCGCG CGCGGATCGT CTCGTCCCTG CGGGCAGCGA GATCGTGATC GCCTCGGGTT TCGATGCGCC GGGCGCCGCA CTGGCGGATC GGCTGAATGC GCTCGGGCGC CGCCGCCTGC CGCGGCTTGT GATGGTGACC GATGGGCAGG GTTTGCCGCG GGGGGTCTAT CCGATCGTCA CCCGAGATGG CCAGCGCCTG CGTGTGACGC TCGGGGGCAG GGCAGGGAAC CGCGGTTCAG TCGCGGCGCT GGTGCAGAAC GTCGTCGGGC ACCCTGCGCT GGTGCTCGAC GCCGGAGCCG ATATCGAAAT GACGGCCCGG AGCATCGCGG CGGCCTTTCC AGCAGAGCGC GTCGCATGA
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Protein sequence | MTDALSAPGV ALRPDPLIAL RRMVLAAKPP QVTAALPGGF ATKRKGHGLE VADLREYVAG DDIRHLDRGT TARTGRLHIR QFQEERDRVT LLVPDFRPAM LWGVRRAFRS VAAAEALALI GWNVIESGGR VGLMTLGQGP PVIVPPAGRV RGMLKLIGGL VRAHEAALAG MAAGQGQDQH LDLALSRADR LVPAGSEIVI ASGFDAPGAA LADRLNALGR RRLPRLVMVT DGQGLPRGVY PIVTRDGQRL RVTLGGRAGN RGSVAALVQN VVGHPALVLD AGADIEMTAR SIAAAFPAER VA
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