Gene Dshi_0457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0457 
Symbol 
ID5711373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp443992 
End bp444900 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content70% 
IMG OID641266361 
Productprotein of unknown function DUF58 
Protein accessionYP_001531806 
Protein GI159043012 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGACG CGCTCTCCGC GCCGGGGGTT GCGTTGCGGC CGGACCCCTT GATCGCGCTG 
CGCCGCATGG TGCTTGCGGC GAAACCGCCA CAGGTGACCG CTGCGCTGCC GGGCGGGTTT
GCGACAAAGC GAAAGGGTCA TGGCCTCGAG GTGGCGGATT TGCGCGAATA CGTGGCAGGC
GACGATATCC GCCATCTGGA CCGGGGCACA ACGGCCCGCA CCGGGCGGCT CCATATTCGC
CAGTTTCAGG AAGAGCGCGA TCGAGTCACC TTGCTCGTTC CCGATTTCCG CCCGGCCATG
CTCTGGGGGG TGCGCCGGGC CTTTCGATCG GTCGCGGCGG CTGAAGCGCT GGCTCTTATC
GGCTGGAACG TGATCGAGAG CGGCGGGCGG GTCGGGCTCA TGACGCTGGG GCAAGGGCCA
CCGGTAATCG TGCCGCCGGC GGGGCGTGTG CGGGGCATGC TCAAACTCAT CGGCGGGCTG
GTGCGTGCAC ATGAGGCCGC TCTGGCGGGC ATGGCGGCGG GGCAGGGGCA GGACCAGCAC
CTCGACCTGG CCCTGTCGCG CGCGGATCGT CTCGTCCCTG CGGGCAGCGA GATCGTGATC
GCCTCGGGTT TCGATGCGCC GGGCGCCGCA CTGGCGGATC GGCTGAATGC GCTCGGGCGC
CGCCGCCTGC CGCGGCTTGT GATGGTGACC GATGGGCAGG GTTTGCCGCG GGGGGTCTAT
CCGATCGTCA CCCGAGATGG CCAGCGCCTG CGTGTGACGC TCGGGGGCAG GGCAGGGAAC
CGCGGTTCAG TCGCGGCGCT GGTGCAGAAC GTCGTCGGGC ACCCTGCGCT GGTGCTCGAC
GCCGGAGCCG ATATCGAAAT GACGGCCCGG AGCATCGCGG CGGCCTTTCC AGCAGAGCGC
GTCGCATGA
 
Protein sequence
MTDALSAPGV ALRPDPLIAL RRMVLAAKPP QVTAALPGGF ATKRKGHGLE VADLREYVAG 
DDIRHLDRGT TARTGRLHIR QFQEERDRVT LLVPDFRPAM LWGVRRAFRS VAAAEALALI
GWNVIESGGR VGLMTLGQGP PVIVPPAGRV RGMLKLIGGL VRAHEAALAG MAAGQGQDQH
LDLALSRADR LVPAGSEIVI ASGFDAPGAA LADRLNALGR RRLPRLVMVT DGQGLPRGVY
PIVTRDGQRL RVTLGGRAGN RGSVAALVQN VVGHPALVLD AGADIEMTAR SIAAAFPAER
VA