Gene Dshi_0414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0414 
Symbol 
ID5711330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp408427 
End bp408873 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content68% 
IMG OID641266319 
ProductGreA/GreB family elongation factor 
Protein accessionYP_001531764 
Protein GI159042970 
COG category[K] Transcription 
COG ID[COG0782] Transcription elongation factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGATA CCAGATCTCG ACCCCAGGCC GCGCCCAAGC CCAAAGGACG CAGGCCCCGC 
ATCGTGATCA ACGCCGACGA CCTGTCGCAT ATCGAAGCCC TGGCCGAAGG CGCGATGGAT
CGCAACCCGG CGCTGGCCGA CCGGCTTTTG GAAGAGATCG CGCGCGCCCG TATCGTGCCG
GCCGCCAAGA TGCCGCTCAA CGTGATCGGG ATCGGCAAAT CCGCCACCTT TCGCGACGAG
ACCACGGGCC AGGAACGCAC CGTGACGCTG GTCTATCCCG AGGATGCAGA CATCTCTCGC
GCGCGGGTGT CGGTGATGAC CCCGATCGGC GTAGCGCTTC TGGGGCTGGC CGAGGGGGCC
GTGTTCCACT GGAACACGCG GGGCGAAGAG CGGCGCATGC TCACCGTGAT CCGCGTGTCC
GATCCCGCCG CGCCCGAGAG CGCGTGA
 
Protein sequence
MPDTRSRPQA APKPKGRRPR IVINADDLSH IEALAEGAMD RNPALADRLL EEIARARIVP 
AAKMPLNVIG IGKSATFRDE TTGQERTVTL VYPEDADISR ARVSVMTPIG VALLGLAEGA
VFHWNTRGEE RRMLTVIRVS DPAAPESA