| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0389 |
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| Symbol | rbsC2 |
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| ID | 5711299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 370545 |
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| End bp | 371618 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641266288 |
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| Product | ribose transport system permease protein rbsC |
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| Protein accession | YP_001531739 |
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| Protein GI | 159042945 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.995697 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAC CGCGCCCGCA AGGCCAGGAC TACGAATCTG CCCTCAAGGA CAGCGCCGCC
GCGGTGGCCG AGTTCGACCA TGGCCCCCAG GGCTTCACGC GGAAGTTCCA GCACGCCCTG
CACCAGACCC CGGCGCTGGT GCCGCTGATC GTGCTGGTGG CGGCCATCGC GGTGTTCGGG
CTGCTCCTGG GCTCGAAATT CTTCTCCCCC TTCGCGCTGA CCCTGATCCT GCAACAGGTG
CAGATCGTCG GCATCGTCGC CGCCGCCCAG AGCCTGGTGA TCCTGACCGC CGGGATCGAC
CTGAGCGTGG GGGCGATCAT GGTGATGAGT TCGGTGGTGA TGGGCCAGTT CACCTTCCGC
TACGGGCTGC CGGTCGAGGT CGCGGTCGCC TGCGGGCTGC TCTGCGGCAC CTTGCTCGGC
TTCATCAACG GCTGGCTCGT GGCCAAGGTC AAGCTGCCGC CCTTCATCGT CACCCTGGGC
ATGTGGCAGA TCGTGCTGGC GGCCAACTTC CTTTATTCCC GCAACGAGAC CATCCGCTCC
CAGGACATCC GCGACCAGGC GCCCCTGCTG CAATTCTTCG GCACCACGCT GGAGATCGGC
GGCGCGCGCC TGACCTACGG CGTGATCTTC ATGGTGCTGC TGGTGATCGT GCTGGCCTAT
GCGCTCAGGC ACACCGCCTG GGGACGCCAT GTCTACGCCG TCGGCGACGA CCCGGAGGCG
GCCGAGCTGT CCGGCGTCCA GGTCAGCAGG ACCCTGATCT CGGTCTACAT GCTGTCGGGA
CTGATCTGCG CCTTCGCGGG CTGGGCCCTG ATCGGACGGA TCGGGTCGGT CTCGCCCACC
TCGGGCCAGC TGGCCAATAT CGAAAGCATC ACCGCCGTGG TGATCGGGGG CATCTCGCTC
TTCGGCGGGC GCGGCTCGAT CCTGGGCGCG TTCTTCGGGG CGTTGATCGT CGGCGTGTTC
ACCCTGGGGC TGCGCCTGCT GGGCGCCGAC GCCCAATGGA CCTTCCTGCT GATCGGGCTT
CTCATCATCG CCGCGGTGGC CGTGGACCAA TGGATCCGAA AGGTGTCGGT ATGA
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| Protein sequence | MTEPRPQGQD YESALKDSAA AVAEFDHGPQ GFTRKFQHAL HQTPALVPLI VLVAAIAVFG
LLLGSKFFSP FALTLILQQV QIVGIVAAAQ SLVILTAGID LSVGAIMVMS SVVMGQFTFR
YGLPVEVAVA CGLLCGTLLG FINGWLVAKV KLPPFIVTLG MWQIVLAANF LYSRNETIRS
QDIRDQAPLL QFFGTTLEIG GARLTYGVIF MVLLVIVLAY ALRHTAWGRH VYAVGDDPEA
AELSGVQVSR TLISVYMLSG LICAFAGWAL IGRIGSVSPT SGQLANIESI TAVVIGGISL
FGGRGSILGA FFGALIVGVF TLGLRLLGAD AQWTFLLIGL LIIAAVAVDQ WIRKVSV
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